| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_0987 |
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| Symbol | rpoB |
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| ID | 4614651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. KMS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008705 |
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| Strand | + |
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| Start bp | 1077658 |
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| End bp | 1081176 |
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| Gene Length | 3519 bp |
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| Protein Length | 1172 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639790664 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_936991 |
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| Protein GI | 119867039 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.65546 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGGAAG GATGCATCTT GGCAGTCTCT AGCCAGAGCA AGTCAGCAAA AGCTATCACC
AATAACTCCG TTCCCGGAGC ACCAAATCGC ATTTCCTTCG CCAAGCTCCG TGAGCCTCTC
GAGGTTCCGG GGCTTCTCGA CGTGCAGACG GAATCGTTCG ACTGGCTGAT CGGCGCCGAC
AGCTGGCGTC AGCGGGCCAC CGCACGCGGT GACGTGAACC CGACCGGTGG CCTCGAAGAG
GTGCTGACCG AGCTCTCGCC CATCGAGGAC TTCTCCGGCT CGATGTCGCT GTCCTTCTCC
GACCCGCGCT TCGACGAGGT CAAGGCACCC GTCGACGAGT GCAAAGACAA GGACATGACG
TACGCGGCCC CGCTGTTCGT CACGGCGGAG TTCATCAACA ACAACACCGG TGAGATCAAG
AGCCAGACGG TCTTCATGGG TGACTTCCCG ATGATGACCG AGAAGGGCAC CTTCATCATC
AACGGCACCG AGCGTGTCGT GGTGAGCCAG CTGGTCCGCT CGCCGGGTGT GTACTTCGAC
GAGTCGATCG ACAAGTCCAC CGAGAAGACG CTGCACAGCG TCAAGGTGAT CCCCGGCCGC
GGTGCGTGGC TCGAGTTCGA CGTCGACAAG CGCGACACCG TCGGCGTCCG CATCGACCGC
AAGCGCCGTC AGCCCGTCAC CGTGCTGCTC AAGGCCCTCG GCTGGACCAA CGAGCAGATC
ACCGAGCGGT TCGGCTTCAG CGAGATCATG ATGAGCACGC TGGAGAAGGA CAACACCGCA
GGCACCGACG AGGCGCTGCT CGACATCTAC CGGAAGCTGC GTCCGGGCGA GCCGCCGACC
AAGGAGTCCG CGCAGACCCT GCTGGAGAAC CTGTTCTTCA AGGAGAAGCG CTACGACCTG
GCCCGCGTCG GCCGCTACAA GGTCAACAAG AAGCTCGGCC TCAACACCGA CAAGCCGATC
ACCAGCTCGA CGCTGACCGA AGAGGACGTC GTCGCCACGA TCGAGTACCT GGTGCGCCTG
CACCAGGGCG ACACCGTGAT GACGGTGCCC GGTGGCGTCG AGGTGCCCGT AGAGGTCGAC
GACATCGACC ACTTCGGCAA CCGTCGTCTG CGCACCGTGG GCGAGCTGAT CCAGAACCAG
ATCCGCGTCG GCCTCTCGCG TATGGAACGT GTCGTGCGTG AGCGCATGAC CACCCAGGAC
GTCGAGGCGA TCACGCCGCA GACCCTGATC AACATCCGTC CCGTCGTGGC GGCGATCAAG
GAGTTCTTCG GTACGTCGCA GCTGTCGCAG TTCATGGACC AGAACAACCC GCTGTCCGGC
CTGACCCACA AGCGTCGCCT GTCGGCGCTG GGCCCCGGCG GTCTGTCCCG TGAGCGTGCC
GGCCTCGAGG TCCGCGACGT GCACTCCAGC CACTACGGCC GCATGTGCCC GATCGAGACC
CCTGAGGGTC CGAACATCGG TCTGATCGGT TCGCTGTCGG TGTATGCCCG GGTCAACCCG
TTCGGCTTCA TCGAGACGCC GTACCGCAAG GTCGAAAACG GTGTGGTCAC CGACCAGATC
GACTACCTCA CCGCCGACGA GGAGGACCGC CACGTCGTGG CGCAGGCCAA CTCGCCGCTC
GACGACGAGG GCCACTTCAC CGAGGACCGC GTCCTGGTCC GCCGGAAGGG TGGCGAGGTC
GAGTTCGTGT CGGCCACCGA GGTGGACTAC ATGGACGTCT CGCCGCGCCA GATGGTGTCG
GTCGCGACGG CGATGATCCC GTTCCTCGAG CACGACGACG CCAACCGTGC CCTCATGGGT
GCCAACATGC AGCGCCAGGC CGTTCCGCTG GTCCGCAGCG AGGCCCCGCT GGTCGGCACC
GGTATGGAGC TGCGCGCCGC GATCGACGCC GGCGACGTCG TCGTCAGCGA GAAGGCGGGC
GTGGTCGAAG AGGTCAGCGC CGACTACATC ACCGTGATGG CCGACGACGG CACCCGGCAC
ACCTACCGGA TGCGCAAGTT CGCCCGCTCC AACCACGGCA CCTGCGCCAA CCAGCGTCCG
ATCGTGGACG CCGGCCAGCG TGTCGAGGCG GGGCAGGTCG TCGCCGACGG CCCCTGCACC
CAGAACGGTG AGATGGCCCT GGGCAAGAAC CTGCTCGTGG CGATCATGCC GTGGGAGGGC
CACAACTACG AGGACGCGAT CATCCTCTCC AACCGTCTGG TTGAGGAGGA CGTGCTCACC
TCGATTCACA TCGAAGAGCA CGAGATCGAT GCCCGTGACA CCAAGCTGGG CGCCGAGGAG
ATCACCCGGG ACATCCCGAA CGTCTCCGAC GAGGTGCTGG CCGACCTCGA CGAGCGCGGC
ATCGTCCGCA TCGGCGCCGA GGTCCGTGAC GGCGACATCC TGGTCGGCAA GGTCACCCCG
AAGGGTGAGA CCGAGCTGAC CCCGGAGGAG CGGCTGCTCC GCGCGATCTT CGGTGAGAAG
GCGCGCGAGG TCCGCGACAC GTCGCTCAAG GTGCCCCACG GTGAGTCCGG CAAGGTCATC
GGCATCCGCG TGTTCTCCCG CGAGGATGAC GACGAGCTGC CCGCCGGCGT CAACGAGCTG
GTCCGCGTGT ACGTCGCGCA GAAGCGCAAG ATCTCCGACG GTGACAAGCT GGCCGGACGC
CACGGCAACA AGGGCGTCAT CGGCAAGATC CTGCCCGTCG AGGACATGCC GTTCCTGCCC
GACGGCACCC CGGTGGACAT CATCCTGAAC ACCCACGGTG TGCCGCGTCG TATGAACATC
GGCCAGATCC TGGAGACCCA CCTCGGGTGG GTGGCCAAGG CCGGCTGGAA CATCAACGTG
GCCGGTGCCG ACGGCGTCCC GGACTGGGCC GAGAAGCTCC CCGAGGAGCT CTACTCGGCA
CCGTCGGACA GCATCGTCGC CACCCCGGTG TTCGACGGTG CCCGCGAGAA CGAGCTGTCG
GGTCTGCTCG CCTCCACGTT GCCCAACCGT GACGGCGACG TCATGGTCAA CGAGGACGGC
AAGGCCGAGT TGTTCGACGG ACGCAGTGGC GAACCGTTCC CGTACCCGGT GACGGTCGGC
TACATGTACA TCCTCAAGCT GCACCACCTG GTGGACGACA AGATCCACGC CCGCTCCACC
GGTCCGTACT CGATGATCAC CCAGCAGCCG CTCGGTGGTA AGGCGCAGTT CGGTGGTCAG
CGGTTCGGCG AGATGGAGTG CTGGGCCATG CAGGCCTACG GCGCCGCCTA CACGCTGCAG
GAGCTGTTGA CGATCAAGTC CGACGACACC GTCGGGCGCG TCAAGGTGTA CGAGGCCATC
GTCAAGGGCG AGAACATCCC CGAGCCGGGC ATCCCGGAGT CGTTCAAGGT GCTTCTCAAG
GAACTGCAGT CGCTGTGCCT CAACGTCGAG GTGTTGTCTT CTGACGGTGC CGCGATCGAG
ATGCGTGACG GTGACGACGA GGACTTGGAG CGTGCCGCTG CCAACCTCGG AATCAACCTG
TCCCGCAACG AGTCCGCGTC CGTCGAGGAC CTCGCCTAG
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| Protein sequence | MLEGCILAVS SQSKSAKAIT NNSVPGAPNR ISFAKLREPL EVPGLLDVQT ESFDWLIGAD
SWRQRATARG DVNPTGGLEE VLTELSPIED FSGSMSLSFS DPRFDEVKAP VDECKDKDMT
YAAPLFVTAE FINNNTGEIK SQTVFMGDFP MMTEKGTFII NGTERVVVSQ LVRSPGVYFD
ESIDKSTEKT LHSVKVIPGR GAWLEFDVDK RDTVGVRIDR KRRQPVTVLL KALGWTNEQI
TERFGFSEIM MSTLEKDNTA GTDEALLDIY RKLRPGEPPT KESAQTLLEN LFFKEKRYDL
ARVGRYKVNK KLGLNTDKPI TSSTLTEEDV VATIEYLVRL HQGDTVMTVP GGVEVPVEVD
DIDHFGNRRL RTVGELIQNQ IRVGLSRMER VVRERMTTQD VEAITPQTLI NIRPVVAAIK
EFFGTSQLSQ FMDQNNPLSG LTHKRRLSAL GPGGLSRERA GLEVRDVHSS HYGRMCPIET
PEGPNIGLIG SLSVYARVNP FGFIETPYRK VENGVVTDQI DYLTADEEDR HVVAQANSPL
DDEGHFTEDR VLVRRKGGEV EFVSATEVDY MDVSPRQMVS VATAMIPFLE HDDANRALMG
ANMQRQAVPL VRSEAPLVGT GMELRAAIDA GDVVVSEKAG VVEEVSADYI TVMADDGTRH
TYRMRKFARS NHGTCANQRP IVDAGQRVEA GQVVADGPCT QNGEMALGKN LLVAIMPWEG
HNYEDAIILS NRLVEEDVLT SIHIEEHEID ARDTKLGAEE ITRDIPNVSD EVLADLDERG
IVRIGAEVRD GDILVGKVTP KGETELTPEE RLLRAIFGEK AREVRDTSLK VPHGESGKVI
GIRVFSREDD DELPAGVNEL VRVYVAQKRK ISDGDKLAGR HGNKGVIGKI LPVEDMPFLP
DGTPVDIILN THGVPRRMNI GQILETHLGW VAKAGWNINV AGADGVPDWA EKLPEELYSA
PSDSIVATPV FDGARENELS GLLASTLPNR DGDVMVNEDG KAELFDGRSG EPFPYPVTVG
YMYILKLHHL VDDKIHARST GPYSMITQQP LGGKAQFGGQ RFGEMECWAM QAYGAAYTLQ
ELLTIKSDDT VGRVKVYEAI VKGENIPEPG IPESFKVLLK ELQSLCLNVE VLSSDGAAIE
MRDGDDEDLE RAAANLGINL SRNESASVED LA
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