Gene Mkms_0918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_0918 
Symbol 
ID4614759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp1004538 
End bp1007786 
Gene Length3249 bp 
Protein Length1082 aa 
Translation table11 
GC content71% 
IMG OID639790592 
ProductDNA helicase/exodeoxyribonuclease V, gamma subunit 
Protein accessionYP_936922 
Protein GI119866970 
COG category[L] Replication, recombination and repair 
COG ID[COG1330] Exonuclease V gamma subunit 
TIGRFAM ID[TIGR01450] exodeoxyribonuclease V, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.200509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATTCC ATCTGCACCG GGCGGAGCGC ACCGACCTCC TGGCCGACGG ACTCGGTGCC 
CTGCTGTCCA CTCCCCTGGC CGACCCGTTC GCCGAGGAAC TCGTGCTCGT CCCGGCGAAG
GGCGTCGAGC GGTGGCTGAG CCAGCGGCTC TCGCACGTCC TCGGCCGCGG TTCCGGCGAC
GACGGGGTCT GCGCGGGCAT CACATTCCGC AATCCGCGGT CCCTCATCGC CGACATTACC
GGTACCCGGG ACGACGACCC CTGGGCCCCC GACTCGCTGG TCTGGCCGCT GCTCGAGGTC
ATCGACGACA ACCTCGACCA ACCGTGGTGC ACCACGCTCG CCACCCACCT CGGCCACTTC
GAACACGGCC AGGAGCAGGA ACTCCGCCAG AGCCGCCGCT ACGCCGTCGC CCGCCGCCTC
GCCGGCCTGT TCGCCTCCTA CGCCCGCCAG CGCCCCGGAC TGCTCGTCGA CTGGCTCGCC
GGCAACCCCG CAGACCTCGA CGACGACCTG CACTGGCAGC CGCATCTCTG GCGACACCTC
GTCGAGCGGG TGCCCGCCGA CCCGCCGCAC ATCCGGCACG CCAAAACCGT TGCCCGCCTG
CATGAATCAC CCAGCAACCT GCCCGAACGC ATGTCGCTGT TCGGCCACAC CCGGCTGCCC
TCCACCGAGG TCGAACTGCT CGACGCGCTC GCCACCCACC ACGATCTGCA CCTGTGGCTG
CCGCACCCCA GCGACGACCT GTGGACCACC CTCGAACCCC ACCGCGGCGC CGTGCGCCGC
CGCGAGGACA ACACCCACCG CGAGGTCGGC CACCCGCTGC TCGCCACCCT CGGCCGCGAC
CTGCGCGAAC TGCAGCGCAG CCTGCCCGAC GATTCGCAGA CCGACGAGTA TCTGGGCACC
GCCGACCATC CCGACACCCT GCTCGGCTGG TTGCAGTCCG ACATCGCCGC CAACGCGGTC
CGCCCCGACG GCCGCCGACT GCACGACCAC GACCGCTCGG TCCAGGTGCA CAGCTGTCAC
GGCGCCGCCC GCCAGATCGA CGTCCTGCGC GAGGTGCTGC TCGGCCTGCT CGTCGACGAC
CCGACGCTCG AACCCCGCGA CATCCTCGTC ATGTGCCCGG ACATCGAGCA CTACGCAGCG
CTGATCGTCG CCGGCTTCGG CCTCGGCGAC GTGATCCACG GTGCGCACCC AGCGCATCGG
TTGCGCGTCA AACTCGCCGA CCGCGCACTC ACCCAGACCA ACCCGTTGCT CGGCGTCGCC
GGTCAACTCC TCGCGCTCGC GGGCGGCCGC GCCACCGCCA CCGAGGTGCT CAACCTCGCC
GAGGCCCCGT CGATCCGGGC GCGGTTCACC TTCAGCGACG ACGACCTCGA CGCGATCGGT
GACTGGGTAC GCGAGGCCAA CATCCGGTGG GGTTTCGACC GCGAGCACCG CCACCCCTAC
GGCGTTGACT TCGTCCAGAA CACCTGGCGT TTCGGACTCG ACCGGGTGCT CGCCGGCGTC
GCGATGTCCG ACGACTCGCA CGCCTGGCTC GACACCACGC TGCCCCTCGA CGATGTCGGC
AGCGACCGCG TCGAACTCGC CGGCCGCCTC GCGGAATACG TCGACCGACT GCAGCATTGC
GTCGAAAACC TCAGCGGCAC AAAGCCACTC CACGAATGGC TCGAAGCGCT GCGCACCGGT
ATCGACCAGC TGACCGCGGT CCCCGACGAC GACACCTGGC AGACCAGCCA GCTGGAGCGC
GAGTTCGCCG ACGTCCTCAC CCAGGCCGGC TCCCGCAAGG ACACCCTGCT GCGCCTACCC
GACGTCAAGG CCCTGCTCGA CCGCCACCTC GCCGGACGGC CCACCCGGGC CAACTTCCGC
ACCGGCACGC TCACCGTGTG CACGATGGTG CCGATGCGCT CGGTCCCGCA CCGGGTGGTG
TGCCTGGTGG GTCTCGACGA CGGGGCGTTC CCGCGCCTGG GCGTGGTCGA CGGCGACGAC
GCACTGGCCC GCGACCCGAT GACCGGTGAA CGCGACATCC GCTCGGAGGA CCGCCAACTG
CTGCTCGACG CGATCGGCGC GGCGACGGAG AGGCTGGTCG TCACCTACAC CGGCGCCAAC
GAGTACTCCG GGCAGCGCAA ACCTCCGGCG GTGCCGCTGG TCGAACTGCT CGACGCGCTC
GACGTCACCA CCGAGGCCCC GGTGCGCAAG CAGATCCTCG TCGAACATCC GTTGCAGCCC
TTCGACGTTC GCAACGTCAC TCCGGGCGCG CTAGGGGTGC CCGGCACACC GTTCACGTTC
GACTCGACGG CGCTGACCGC CGCGACCGTC GCGTCCGGGG ACCGCGCCGA GCGGCCGGGT
CTGCTCACCC ATCCGCTGCC TGCGCCACCG GAGGACGACG TCGCGCTCGA CGATCTGATC
GGCTTCTTCA AGGATCCGGT CAAGGGGTTC TTCCGGGCGC TGGACTTCAC GCTGCCGTGG
GACGTCGACG CCGTCCAGGA CGCCATGCCG GTGGAGATCG ACGCGCTGGC CGAATGGCAG
GTCGGCGAAC GGATGCTCGA CGACATGCTG CGCGGCCTCA ATCCCGAACA GGCGCAACAG
GCGGAGTGGC GGCGCGGGTC GCTGCCACCC GGCCGGCTCG GCTGGCGCAA GGCGCAGGAG
TTGCGCGATC AGGCCGCCGC GCTGGCCACC GCGGCGCACC GGCACCGACG GCAACCGGCC
CGGGCGTATG ACGTCGACAT CCACCTCGGT GGCGGCCGGC GCGTCACCGG CACGGTCCCG
AAGGTGTACG GCGACCGCAC GGTCACCGTC ACGTACTCCA AACTCGACGG CCGCCACCTG
CTGGCGTCGT GGATCCAGTT GGCGGCGTTG ACCGCTCAAC TTCCCGGTAC GGACTGGGCG
GCGGTGTGTA TCGGCCGGCC GAAGCGTGGC GCCACCCCGC GGGAACGGAT GCTCGGCGCG
CCCGGGGATG CCACCGGTGT GCTGCGCGAT CTGGTGAACA TGTACGACGC GGGGCGCCGT
GAGCCGATAC CGCTGCCGCC GAAGACGTCC TATGCGTGGG CCGAGGCGCG TCACAGTCGT
GGAGACGCGG AGCGCGAGTC GCGATACCGC TGGAAGTCGG ACCGCTACCC GGGTGAGGAC
GCCGAACCGG CCAACGTACG GGTGTGGGGG GCGCACGCCC CGCTGGACAC CCTGCTCGCG
GCGGGCATGG ACGGCTACGC CGGACGCCTG TGGCTGCCGA TGCTGGAAGC CGAGAGGGAC
CCCGACTGA
 
Protein sequence
MPFHLHRAER TDLLADGLGA LLSTPLADPF AEELVLVPAK GVERWLSQRL SHVLGRGSGD 
DGVCAGITFR NPRSLIADIT GTRDDDPWAP DSLVWPLLEV IDDNLDQPWC TTLATHLGHF
EHGQEQELRQ SRRYAVARRL AGLFASYARQ RPGLLVDWLA GNPADLDDDL HWQPHLWRHL
VERVPADPPH IRHAKTVARL HESPSNLPER MSLFGHTRLP STEVELLDAL ATHHDLHLWL
PHPSDDLWTT LEPHRGAVRR REDNTHREVG HPLLATLGRD LRELQRSLPD DSQTDEYLGT
ADHPDTLLGW LQSDIAANAV RPDGRRLHDH DRSVQVHSCH GAARQIDVLR EVLLGLLVDD
PTLEPRDILV MCPDIEHYAA LIVAGFGLGD VIHGAHPAHR LRVKLADRAL TQTNPLLGVA
GQLLALAGGR ATATEVLNLA EAPSIRARFT FSDDDLDAIG DWVREANIRW GFDREHRHPY
GVDFVQNTWR FGLDRVLAGV AMSDDSHAWL DTTLPLDDVG SDRVELAGRL AEYVDRLQHC
VENLSGTKPL HEWLEALRTG IDQLTAVPDD DTWQTSQLER EFADVLTQAG SRKDTLLRLP
DVKALLDRHL AGRPTRANFR TGTLTVCTMV PMRSVPHRVV CLVGLDDGAF PRLGVVDGDD
ALARDPMTGE RDIRSEDRQL LLDAIGAATE RLVVTYTGAN EYSGQRKPPA VPLVELLDAL
DVTTEAPVRK QILVEHPLQP FDVRNVTPGA LGVPGTPFTF DSTALTAATV ASGDRAERPG
LLTHPLPAPP EDDVALDDLI GFFKDPVKGF FRALDFTLPW DVDAVQDAMP VEIDALAEWQ
VGERMLDDML RGLNPEQAQQ AEWRRGSLPP GRLGWRKAQE LRDQAAALAT AAHRHRRQPA
RAYDVDIHLG GGRRVTGTVP KVYGDRTVTV TYSKLDGRHL LASWIQLAAL TAQLPGTDWA
AVCIGRPKRG ATPRERMLGA PGDATGVLRD LVNMYDAGRR EPIPLPPKTS YAWAEARHSR
GDAERESRYR WKSDRYPGED AEPANVRVWG AHAPLDTLLA AGMDGYAGRL WLPMLEAERD
PD