| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_0917 |
|---|
| Symbol | |
|---|
| ID | 4614758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | - |
|---|
| Start bp | 1001191 |
|---|
| End bp | 1004538 |
|---|
| Gene Length | 3348 bp |
|---|
| Protein Length | 1115 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639790591 |
|---|
| Product | DNA helicase/exodeoxyribonuclease V, beta subunit |
|---|
| Protein accession | YP_936921 |
|---|
| Protein GI | 119866969 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
|---|
| TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.45261 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGAAAC AAATGCGCGA TCCGCTCCGC TCCTCGCTGG ACTTTGACCT GCTCGGCCGG
CTGCCTGCGC CCCTCACCAC GACGGTGCTG GAGGCGAGTG CGGGCACCGG CAAGACGTTC
GCGCTCGCGG GTCTGGTGAC GCGGTACATC GCCGAGGGTG CAGCGACGCT CGACCAGATG
CTGCTCGTGA CGTTCGGCCG GGCGGCCAGT CAGGAACTGC GGGAGCGGGT GCGCTGTCAG
ATGCTCGACG CGCTGGTCGC CTTCGAGGAC CCGTCGACCG TCGGCGACAA CCAACTCGTC
GAGCACCTGA TCGACGCCCC CGACGACGAA CGGCACCTGC GCAAGCAGCG GCTGAAAGAC
GCGTTGGCCG GTTTCGACGC CGCCACCATC GCCACCACGC ATCAGTTCTG CCAGCTGGTC
CTGAAATCGC TTGGCGTGGC CGGGGATACG GATACCGGTG TGCAGCTCGT GGAGAGCCTC
GACGACCTGA CCGCCGAGAT CGTCGACGAT CTGTACCTCG CCCACTTCGG CCAGCAGCGT
GACGATCCGG TGATGACCCG CGGTCAGGCG CTGGAGCTCG CCCGCGAGGT CGTCGGCAAC
GCCGGCACCG AACTGCGGCC GCAGAACCCG CCGCCCGAGA CGGAGGCCGC GGCGCGCGTC
GAGTTCGCCA AGGCGGTGTG CGCCGAACTC GAGCGACGGA AACGCCGGCT CGGCATCCTG
CACTACGACG ATCTGCTGTC CCGGCTGGCC AACGCGCTCA CCGGCGAGGA TTCCCCGGCC
CGCACCCGCA TGCACCGCCG CTGGTCGATC GTGATGGTCG ACGAGTTCCA GGACACCGAT
CCGGTGCAGT GGCAGGTGCT CGACCGGGCG TTCACCGGGC GTTCGACGCT GATCCTGATC
GGCGATCCCA AACAGGCGAT CTACGCGTTC CGCGGCGGCG ACATCGCCAC CTACCTGCAC
GCCGCGAGCA CGGCCGGCCA CCGGCAGACC CTCGGCACGA ACTGGCGCAG CGACGGCGAT
CTGGTCGACC GGCTGCAGGT CGTCTTGCGC GACGCCGAAC TCGGCGACCC CGAGATCGTG
GTGCGCCCCG TCGAGGCCCG GCACAAGGGC CACCGGCTCG CGGGGGCACC GCACAACGAT
CCCTTCCGCC TGCGCATCGT CTCCCGCGAC ACCTTCGGCA TCCGCGGCGA CCGCACCATC
CCAATCGACA GGCTGCGACC GCACATCAGC GCCGACCTCG CCGCCGACAT CGGCCGTCTG
CTGGCCAGCG GAGCGACGTT CTGCGACAAG AAGATCGAAG CCAAGGACAT CGCGGTGATC
GTCGAGAAAC ACAAGGACGC CCGCGCCTGC TTCGACGCGC TCTCGGTGGC CGGCATCCCC
GCGGTCTACA CCGGGGACTC CGACGTGTTC AACTCCCCCG CGGGTGACGA CTGGCTGTGC
CTGCTCGAGG CGTTCGACCA GCCGCACCGC TCCGGACTGG TGCGCGCCGC GGCCACCACG
ATGTTCTTCG GCCGCACCGC CGAAGAGCTC GCCGCGCGGG GCGACCGGCT CACCGACGAG
ATCGCCGACC GGTTGCGCGA GTGGGCCGAT CACGCCCGCG AGCGCGGCGT CGCCGCCATC
TTCGAGGCGG CCAACATGAC CGGTATGGGC AGGCGGGTGC TGTCCTGGCG CGACGGGGAG
CGCCACATGA CCGACCTCGC CCACCTGACG CAGGTGCTGC ACGAGACCGC GCACCGCGAA
CACTTCAACC TGCCCGCCCT GCGGGACTGG CTGCGCACCC AACGCGAGGA GCGCAGCGGC
GCCACCGAAC GCAACCGCCG CCTCGACAAC GACGCCGCGG CCGTGCAGAT CATGACGGTC
TGGGTCAGCA AGGGTCTGCA GTATCCGGTG GTGTACCTGC CGTTCGCGTT CAACCGCAAC
ATCCAGACCC GCGACTGCGT GCTGTTCCAC GACGACCGCA CCCGCTGTCT GCACATCGGC
GGCGACGACA GCCCCGACCA CGCACAGGTC GAACGGCTCG GCCGCAAGGA GGCCGCCGGC
GACGACATAC GCCTCACCTA CGTCGCGCTG ACCCGGGCGC AGTCCCAGGT GGTCGCCTGG
TGGGCGCCGT CGTGGGACGA ACCCAACGGC GGGCTGTCCC GGCTGCTGCG CGGGCGCGCC
CCCGGGGAGA CGACCGTCCC GGACCGCTGC GACCCGCCGA AACTCGACGA TGCGGACGCC
AGGACGGCGT TGCGCGCCTG GGCGGATCTC GGCGGCCCGG TGCTCGAGGA CTCCGAGATC
GCCGCACCCG CCGCACCCGA GCTCCGCGAG CACCCGACGG ATCTCGACGT GCGGCACTTC
CACCGCGGCA TCGACACCGC GTGGCGACGC ACGTCGTACT CGGGCCTGCT GCGGGCCGCC
GAGGGCTCGC CGGCCGTCGC CGGGGTGACC AGCGAGCCCG AGGTCGGTGA ACTCGACGAC
GAGGCCGCCG AGGTGCCGGT CAGCGAGAGC CACACCGACG TCGACCCGGT GCCGTCGCCG
ATGGCGGAGC TGCCGACGGG TGCGAAGTTC GGGTCGCTGG TGCACGCGGT GCTCGAACAC
GCCGATCCGT TCGCCGCCGA CCTGAAGGCC GAACTCGAGC ACAGGATCCG CGAACACATG
GTGTGGTGGC CGGTCGACGT CGAGGCCGAG GCGCTGGCCG ACGCGCTGCT GCCGATGCAC
GACACCCCGC TCGGCCCCCT CGCCCCCAAC GTGACACTGC GGCAGATCGG GCCGCGGGAT
CGACTGCGGG AGTTGGACTT CGAGTTCCCG TTGGCCGGCG GCGACGTGCG CGGGGGTGCA
CCGGCGATCA CGCTGGCCGA TGTCGGCCGC CTACTCGGCG CGCACCTGCC CGCCGACGAC
CCGATGACGC CGTACGTCGA CCGGCTCACC GACCGGGCGC TGGGCGGCCA GTCGCTCAAG
GGGTACCTGA CGGGTTCGAT CGACGTGGTC CTGCGCGTCC GTGACACCAC CGGGGTGCGC
TACGTGGTGG CCGACTGGAA GACGAACTGG CTCGGTGAAC GCGAAAAACC CCTGACCGCC
GCCGATTACA GCCGCACCCG GATGGCCGAA GCGATGCTGC ACTCGGACTA TCCGCTGCAG
GCCCTGCTGT ATTGCGTTGT CCTGCACCGG TTCCTGCGGT GGCGGCAACC GGGTTACGAT
CCGGCGAAGC ATCTCGGCGG GGTGCTGTAC CTGTTCGTGC GCGGGATGTG CGGGGCGTCC
ACACCGGTGG TCGACGGCGA TCCGACCGGG GTGTTCAGCT GGCGGCCGCC CGCTTCGCTG
ATCGTGGCGC TGTCCGATCT GCTCGACGCC GGCGCCGCGG CGGCCTGA
|
|---|
| Protein sequence | MRKQMRDPLR SSLDFDLLGR LPAPLTTTVL EASAGTGKTF ALAGLVTRYI AEGAATLDQM
LLVTFGRAAS QELRERVRCQ MLDALVAFED PSTVGDNQLV EHLIDAPDDE RHLRKQRLKD
ALAGFDAATI ATTHQFCQLV LKSLGVAGDT DTGVQLVESL DDLTAEIVDD LYLAHFGQQR
DDPVMTRGQA LELAREVVGN AGTELRPQNP PPETEAAARV EFAKAVCAEL ERRKRRLGIL
HYDDLLSRLA NALTGEDSPA RTRMHRRWSI VMVDEFQDTD PVQWQVLDRA FTGRSTLILI
GDPKQAIYAF RGGDIATYLH AASTAGHRQT LGTNWRSDGD LVDRLQVVLR DAELGDPEIV
VRPVEARHKG HRLAGAPHND PFRLRIVSRD TFGIRGDRTI PIDRLRPHIS ADLAADIGRL
LASGATFCDK KIEAKDIAVI VEKHKDARAC FDALSVAGIP AVYTGDSDVF NSPAGDDWLC
LLEAFDQPHR SGLVRAAATT MFFGRTAEEL AARGDRLTDE IADRLREWAD HARERGVAAI
FEAANMTGMG RRVLSWRDGE RHMTDLAHLT QVLHETAHRE HFNLPALRDW LRTQREERSG
ATERNRRLDN DAAAVQIMTV WVSKGLQYPV VYLPFAFNRN IQTRDCVLFH DDRTRCLHIG
GDDSPDHAQV ERLGRKEAAG DDIRLTYVAL TRAQSQVVAW WAPSWDEPNG GLSRLLRGRA
PGETTVPDRC DPPKLDDADA RTALRAWADL GGPVLEDSEI AAPAAPELRE HPTDLDVRHF
HRGIDTAWRR TSYSGLLRAA EGSPAVAGVT SEPEVGELDD EAAEVPVSES HTDVDPVPSP
MAELPTGAKF GSLVHAVLEH ADPFAADLKA ELEHRIREHM VWWPVDVEAE ALADALLPMH
DTPLGPLAPN VTLRQIGPRD RLRELDFEFP LAGGDVRGGA PAITLADVGR LLGAHLPADD
PMTPYVDRLT DRALGGQSLK GYLTGSIDVV LRVRDTTGVR YVVADWKTNW LGEREKPLTA
ADYSRTRMAE AMLHSDYPLQ ALLYCVVLHR FLRWRQPGYD PAKHLGGVLY LFVRGMCGAS
TPVVDGDPTG VFSWRPPASL IVALSDLLDA GAAAA
|
|---|
| |