| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_0885 |
|---|
| Symbol | |
|---|
| ID | 4614726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | - |
|---|
| Start bp | 968142 |
|---|
| End bp | 969743 |
|---|
| Gene Length | 1602 bp |
|---|
| Protein Length | 533 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639790559 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_936889 |
|---|
| Protein GI | 119866937 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component
[COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTGACGG AGTTCTGGTA TTACTTCACG CTGCCGGAAC TGATCGACGG TGGCCTGCTG
GCACTGCGGA TCGCGCTGCT GTCGCTGATC ATCGCCTGGC CGGCGGGGCT GCTGCTCGCG
CTGATCAGCG ATTCGCGCTG GTTCCTGCCA CGGTTGGCGG TGGGCGTCTA CATCTGGGTG
CTGCGGGGCA CGCCGATACT GTTGCAGTTG ATCTTCCTCT ACAACGTTCT CCCCCAATGG
GGTTGGCAGC TGTCGTCGGA GACCACCGCC GTCCTCGGGC TCGCGCTCAA CGCAGCGGCG
TTCGCGGCGG AGATTTTCCG CGGCGGACTC AACGCCGTCA ACGTCTCCCA GATCGACGCC
GCCAGGTCGA TCGGCCTGTC ACCGGCGTTG ACGCTGCTGC GCATCCGGCT GCCCCAGGCA
CTGCGGGTGA TCACGCCGGC ACTGGCCAGC GAGGCCATCA TGACGGTCAA GAACACGTCG
CTGGCCTCGG CGATCGCGGT GGCCGAATTG ACGTTGCGCA GCCAGCAGCT GGTGTCGATC
AACTTCGAGT ACCTGCCCGT CTTCGGCGCC GCCGCGGCGA TCTACCTGGC GCTCAACACC
ATCCTCATGG TGGTGCAGTA CCTCAGCGAA CGGCGCCTCG ACAACGACAG ACAGCGGCAC
CGCGGTCCAC TCGCATCGTG GTTGGTTGCC CGCATGCACC TTTCGGCTCC GTCGGCCCGC
GGCGCCGACG AAACTCCGGT ACAGCTGGAT CTGCACGCCC CGGAGTTCCA GACCTACTGG
GACCGGGTCC GCACCGTCGC CGGCCGTGAC ATGACCGAAC AGCCGACCGT GATCAGCGTC
CGGGGACTCC GCAAGACCTA CGGCGGCACC GTCGTCCTCG ACGACGTCGA CCTCGACGTG
CAGCGCGGCG AAGTGGTCTG CATCCTCGGG TCGAGCGGTT CGGGCAAGAG CACACTGCTG
CGCGCCATGG ACGGTCTGGT CGAGGTCGAC GACGGTTCGG TGGTGGTCAA CGGCGTGACC
ATCGCGGGAT CGGGCGCGGG CCGGCTCACC GCCAAGGACC GGCTGCGCGC GGGCCTGGCG
ATCGTCTTCC AGCAGTTCAA CCTGTTCCAG CACATGACCG TGGCGGCCAA CCTCCGGGAG
GGTCAGGCGC GCGTGCTGGG CCTGACGCGC CGCCACACCA CCGACGTCAA CAACATGCTG
CTGCGCGAGC TGGGTGTCGA GGCCACCGCC GACCGCTATC CCGGGCAGCT CTCCGGTGGG
CAGCAGCAGC GCGTCGCGAT CGCCCGCGCA CTCGCCCTGG CGCCGGAGGT CATGCTCTTC
GACGAGCCGA CCTCGGCGCT CGATCCCGAG CGGGTCGGCG ACGTCCTGCG CATCATGCGC
CAACTGGCCG ACCAGGGTAT GACGATGGTG GTCGTCACCC ACGAGATCGC GTTCGCCCGG
CAGTGCGCAT CGCGCGTGGT GTTCGTCGAC GACGGCCGGA TCGTCGAACA GGGCCCGCCG
GAACGCGTCC TCGATGCGCC GAGCAGCGAA CGCACCCAAC GGTTCCTGTC CGCCCTGCTG
CCCGACACCA AACCCCTCAC CCACCGAAAG GTCCTGCAGT GA
|
|---|
| Protein sequence | MLTEFWYYFT LPELIDGGLL ALRIALLSLI IAWPAGLLLA LISDSRWFLP RLAVGVYIWV
LRGTPILLQL IFLYNVLPQW GWQLSSETTA VLGLALNAAA FAAEIFRGGL NAVNVSQIDA
ARSIGLSPAL TLLRIRLPQA LRVITPALAS EAIMTVKNTS LASAIAVAEL TLRSQQLVSI
NFEYLPVFGA AAAIYLALNT ILMVVQYLSE RRLDNDRQRH RGPLASWLVA RMHLSAPSAR
GADETPVQLD LHAPEFQTYW DRVRTVAGRD MTEQPTVISV RGLRKTYGGT VVLDDVDLDV
QRGEVVCILG SSGSGKSTLL RAMDGLVEVD DGSVVVNGVT IAGSGAGRLT AKDRLRAGLA
IVFQQFNLFQ HMTVAANLRE GQARVLGLTR RHTTDVNNML LRELGVEATA DRYPGQLSGG
QQQRVAIARA LALAPEVMLF DEPTSALDPE RVGDVLRIMR QLADQGMTMV VVTHEIAFAR
QCASRVVFVD DGRIVEQGPP ERVLDAPSSE RTQRFLSALL PDTKPLTHRK VLQ
|
|---|
| |