Gene Mkms_0884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_0884 
Symbol 
ID4614725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp967099 
End bp968145 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content67% 
IMG OID639790558 
ProductD-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 
Protein accessionYP_936888 
Protein GI119866936 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCTTCC CCCTCACCGA CGAGCTCGAC GTGGTGGTCG CCGGGGTGCC CTACGGCTTC 
CAGGGGGAAT TCAGCGACGG GCGCTGGCTC ACCGACCGCC ACATCGCCCG GATCGAGGCG
TGCTCCCCGG GAATCCGGTT GGAACATCCG TCCGTCTACG ACCTCAACGA CGGCTACCTG
GTGGAGCGCA AACCGCACGC GGTGCTCGTC GAGTGCACCG GCACCGAAGC GAGTTGGGAG
TCGCTGCCGG CGATCCTGTT CCAATCCGGT TTCCGGCAGC TGCTCAGCCC GGAGCTGCGC
CTCGTCCAAT CCTGCAGTGC CGGAATCGAA CAGATCGCCG GGCTCATCCC CGACGGTGTC
ACGTTGTGCA ACGCCTCCGG GGTGCACGCC CCGGCCATCG CCGAGAGCGT CATCGCCGCG
ATCCTGGCGC AGGCCAAGCT CCTGCACCAG AGGCGTATCG AGCAGCGATC GAGGAACTGG
ACCCAGCTGC CCGCGCGCGA ACTGGCAGGC ACCACGATGT GTGTCCTGGG CACCGGGCAC
ATCGGCACGG CCATCGGCAG CCTGGCCCAG GCGCTCGGGA TTCACACGAT CGGGGTACGC
CGCAATCCGC TCCCCGCCGA GGGCTTCGAC ACGACGGTCG GTCCCGACGG CCTCGACGAT
GCGCTCTCGC GCGCCGACTA CCTCGTCATC GCCTGCCCAC TGACCGCCGA CACCCGCGGA
CTCATCGACG CCGACCGGTT CGCCAAACTG CCCACCGGCG CCTATCTGGT GAACGTGTCA
CGCGGCGCGG TCGTCGACGA GGCGGCGATG ATCGACGCGT TCGAGACCGG CCGGCTCGGC
GGTGGATTCC TCGACTGCCA TGTGCACGAA CCACTTCCCG ACGACAGCCC CCTGTGGGAT
ATGCCGGGGG TGGACATCTC ACCGCACGAT TCGCATGCGT CGAACCTGCT CGGTGACCGG
CAGGTCGACC TCTTCTGCCG CAACCTCGAA CGACTCATCC GCGGTGAGCC GTTGATCAAT
GTCGTCGACA CGAAGGCGGG TTATTGA
 
Protein sequence
MSFPLTDELD VVVAGVPYGF QGEFSDGRWL TDRHIARIEA CSPGIRLEHP SVYDLNDGYL 
VERKPHAVLV ECTGTEASWE SLPAILFQSG FRQLLSPELR LVQSCSAGIE QIAGLIPDGV
TLCNASGVHA PAIAESVIAA ILAQAKLLHQ RRIEQRSRNW TQLPARELAG TTMCVLGTGH
IGTAIGSLAQ ALGIHTIGVR RNPLPAEGFD TTVGPDGLDD ALSRADYLVI ACPLTADTRG
LIDADRFAKL PTGAYLVNVS RGAVVDEAAM IDAFETGRLG GGFLDCHVHE PLPDDSPLWD
MPGVDISPHD SHASNLLGDR QVDLFCRNLE RLIRGEPLIN VVDTKAGY