Gene Mkms_0852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_0852 
Symbol 
ID4614872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp932443 
End bp933189 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content69% 
IMG OID639790527 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_936857 
Protein GI119866905 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAG CACCCCTGAC CGGACGGCGG GCACTGGTGA CCGGAGGGTC GCGCGGGATC 
GGCGCGGAGA TCGTGCGGCG ACTGGCCGCC GACGGCGCCG CGGTGGCGTT CACCTACTCG
GCGTCCGGCA CGAACGCGGA GAAACTCGTG GCCGAGGTGG CTGCGGACGG TGGCACGGCG
GTGGCCATTC AGGCGGATGC AGCCGATCCG GCGCAGACTG CGGCCGCCGT CGACCGTGCG
GTCGCCGAAC TCGGCGGCCT GGACATCGTG GTGAACAACG CCGCCGTCGC GCACATCGCG
CCATTCGACG AGTTCCCGGC CGAACAGTTC GACCGTCTGG TGGCCATCAA CATCGGTGGC
ATGTACTGGA CCACCCGCAC CGCGATCAAG CACCTGGGTG AGGGTGGGCG GATCATCAAC
ATCGGCAGCA TCAACGCCGA CCGCATTCCC GGGCCCGGAC TGTCGGTCTA CGGCATGACC
AAGGGGGCGG TGGCGTCGTT CACCCGCGGA CTGGCCCGCG ACCTCGGCGC GAGCGGCATC
ACCGTCAACA ACGTGCAGCC CGGGCCGATC GACACCGACG CCAACCCCGA CAACGGCGAC
TTCGCCGAGA GTCTCAAGCA GGTCACCACG CAGGGCCGCT ACGGGCACAC CACCGACGTC
GCCTCGTTCG TGAGCTTCCT GGCCGGCCCG GAGTCCGGAT ACATCACGGG CGCGAACCTG
AACGTCGACG GCGGCTTCAC CGTCTGA
 
Protein sequence
MSTAPLTGRR ALVTGGSRGI GAEIVRRLAA DGAAVAFTYS ASGTNAEKLV AEVAADGGTA 
VAIQADAADP AQTAAAVDRA VAELGGLDIV VNNAAVAHIA PFDEFPAEQF DRLVAINIGG
MYWTTRTAIK HLGEGGRIIN IGSINADRIP GPGLSVYGMT KGAVASFTRG LARDLGASGI
TVNNVQPGPI DTDANPDNGD FAESLKQVTT QGRYGHTTDV ASFVSFLAGP ESGYITGANL
NVDGGFTV