Gene Mkms_0646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_0646 
Symbol 
ID4615029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp703879 
End bp704415 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content69% 
IMG OID639790321 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_936652 
Protein GI119866700 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.825839 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCGTA TCGCACCCGG CGGATTCCGG GAACTGGGAC CCCTGAACTG GGCCATCGCG 
AAGGCGGGTG CCCGTGCCAT CCGCGCGCCG CGCTTCAGCC TGTTCAACGT GCTCGGCCAA
CACCGTCTGC TGTTCCTGGC GTTCCTGCCC TACAGCGGTG TGCTGCTCGG CCGCCTCGGC
AAGCTGTCCC GTCAGGACGC CGAACTCGTG ATCCTGCGGG TCGGCCATCT GCGCGAGTGT
GAGTACGAAC TGCAGCAGCA CCGCCGGCTG GCCCGCAGCC GCGGCGTCGG CGCGGACCTT
CAGGCCCGGA TCTTCGAGGG CCCCGACGCC GAGGGTCTCA CCGACCGGCA GCGGGTGCTC
GTCACCGCCA CCGACGAGTT CGTCGTCACC CGAGGGGTGT CACCGCAGAC GTGGTCGGTG
CTGGCCCGGC ATCTCACCAA ACCTCAGCTC ATCGAATTCT GCCTGCTGGC AGCGCATTAC
GACGGTCTGG CGGCGACGAT CAGCACGCTG CAGGTGCCGC TCGACTTCCC GGACTAG
 
Protein sequence
MTRIAPGGFR ELGPLNWAIA KAGARAIRAP RFSLFNVLGQ HRLLFLAFLP YSGVLLGRLG 
KLSRQDAELV ILRVGHLREC EYELQQHRRL ARSRGVGADL QARIFEGPDA EGLTDRQRVL
VTATDEFVVT RGVSPQTWSV LARHLTKPQL IEFCLLAAHY DGLAATISTL QVPLDFPD