Gene Mkms_0578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_0578 
Symbol 
ID4615122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp634427 
End bp637186 
Gene Length2760 bp 
Protein Length919 aa 
Translation table11 
GC content71% 
IMG OID639790253 
Productregulatory protein, LuxR 
Protein accessionYP_936584 
Protein GI119866632 
COG category[R] General function prediction only 
COG ID[COG3899] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.353611 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0294129 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCCTGC AGCTCATCAG CCGCGACGCG GAGTTGAGCG CTGTCGACGA CCTGCTCTCC 
GCAGTGCCGA CGGGTACCTG CGTGCTGGTG CTCGAAGGCG ATGTCGGGAT CGGTAAGAGC
ACCGTGTGGC GCGCAGGCAT CGAACGCGCC CGGACCCGCG GCTTCCGGGT GCTCGCGGCG
CACCCGGTGT CCAGCGAGTC GGTGGCCGCG TACTCATCGC TGGCCGAACT GCTCGCCGAT
GTGGACACCG AGGTGCTGGA CCACCTGCCC GCCCCGCAAC GAGTCGCGAT CGACCGGGTC
CTCTCTCGCG CCGACGACAC GGGACCCGGC ACCGATCAAC GCGCGGTGGC CGCCGCCGTC
CGGTCGGTGC TCGAACGGCT GGCCCACGAC AGTCCCGTCC TCGTCGCGAT CGACGATCTG
CAGTGGCTCG ACCCGCCGAC CGCCGCCGTT CTCGCGTCGG TGGCCCGCCG GTCCGCGGGC
GCCATCGGTT TCCTCGTGAC CGTGCGCTCC GGCGCAGGCG ACCACACCGA GACGCTGCTC
GAACCGTCGC GTCCGGAGCG TCTGCACCGG GCCCGGGTGC ATCCGATGAC GGTCGGGGGC
CTGCACGCCA TGATCAGCCA CCAGCTGGGC CGGTCGCTGA CCCGCCCGAG AATGGACTGG
GTGTACGAGG TTTCGGCCGG AAACCCGCTC TACGCCCTCG AATTGGCGCG GGCACTGGAC
CGGGACGCCA CCGGTGTCGG GCCGCTGCCG GCCACCCTCG CCGATCTGGT GCGGACACGC
ATCTCCGGTT TGCCCGACCA CACCCGGGAG GTCCTCCTCG CCACCGCCTG TATCGCGTCG
CCCACCGTGG ACCTGGTGGC GCGCGCCGTC GGCGACAACG TCGAGTGGAC CGTCGCGGCT
CTCGAGGAGG CCGAACGGCA CGGCGTCGTC GAGATCACCG GCTACAAGGT GACTTTCAGC
CATCCCCTGT TGGCCCGTGG CGTGTACGCC GAGGCGTCCG CGGACGAACG GCGGTGGATG
CACCGCCGGT TGGCCGACAT CGTCGAGAGC CCCGAGTCCC GGGCCCGGCA CCGCGCCCTC
TCGAGTGACG GCGCCGACGA GCAGACGGTC AAGGCGCTCG ACGAGGCGGC CGAATCGGTC
CACCTGCGCG GCGCACCCGC GACCGCCGCC GAACTGCTCG ACATGGCCCG TGCCCGCGGG
GGTGACACCC CTGAACGCAC GCTGCGTGCC GCGGCCTGCC ACTTCGAGGC GGGTGATGCC
GCGCGGGCAC GAGTGTTGTT GGAACACGCC CTTTCCGAGA TCCCGCCGGG TGAGCTGCGG
GCCCGGGCGC TGCAGCTGCT CGGTCTGGTA CGGCTCTACG CCAACAGTTC GTCCGAGGCG
GTGCCGATGC TCGAACAGGC CATCGCCGAG CCGGGCGTCA ACCCGGACCG CCGGGTGCAC
ATGCTCGTCA TGTTGGCGTT CATCGAGTTC AACGCGGGGC GCGCGGACCG GGCGGTGCAG
CGCGCGGAAG AAGCCGTGAC ACAGGCGATG ACACTGCATC GGCCGGATCT GATCACCCAG
GCCAAGCCGA TTCGCGCGCT GCTGCGGTTC CTGCTCGGCG AGGGTTTCGA CGAGGCTGAA
CTCGACGGCG TGTTCGATTT CGACGAGCCC GAGGGCCTAC CGCTGGCCGC GCAGCCGAGG
ACCCTGCACG CCCTGCTGAT GTTGTGGACC GACCGGCTCG ACGAGGCCGC CGACCAGTTC
AACGCGATCG CACAGCGCTG CATCGAACGG GGCGACGAAA GCGAGCGGGC GTTTGTCGAC
TTCCATCTCG GGCAGGTCAA CGTCTGGCGG GCCGACCTCG CGGCCGCGGA ACGGGTCGCC
GAGGACAGCG TCGAGCGGGC GTTGCAGTCC CACGGTGACC TGCCGCTGTT CGTCGCGTTG
ATCGTGCGGG TCATGGTGAG TGCCCACTTC GGCCGCGAGG ACCAGACGCG CCGGTTCGCC
GCCCAGGCGC GGACGGTCGG GGAGCGGTGT GAGTCCAGCC GTCTCGGGGT GTGGCTGACT
ACGAGCCTGG GTTTCCTCGA GTTGTCGCTG GGCGACCACC GGGCCGCGGT GGACGTGTTG
AGTCCGGCGG TCGAGGGCTG GTCGTCGGCG GCGACCGGGA TCCCGGCGCC CACCGAACTC
GTCACGGCGC CGTTCCTGCC GGACGCGGCG GAGGCGCTCA TCGGCATCGG CCGCCTCGAT
GAGGCGGAAC GGCTCGTCGA GGCGTTGGAG GCCAACGGAA CCCGCCTCGA CCGGCCGTGG
ATGCTCGCCC TCGGTGCGCG CTGCCGGGCG CTGCTGCTCG CCGCACGCGG TGACCTGACC
GCCGCCGTCA GGGCCGGTGA GCGCGCGTTG ACCGAGCACG GCCGGCTGTC GATGCCGTTC
GAACTCGCCC GCACCCAACT CGTGGTCGGC CGGTTGCAAC ACCGGCGGCG CCAGTACGAC
GCCGCCACCG CCACCGTCTC GACCGCTCTC GCGGCGTTCG AGCGCATCGG GGCGGAGCTG
TGGGCGCGGC AGGCCCGCGC CGAACTCGAC GCGCTGACCG GTAGGCAGAC CGCGGCCGGC
CTCGCCGAAT CCGAGCGCCG CTTCGCCGAT CTCGCCGTGC AGGGGATGAC GAACCGTGAG
ATCGCCGCGA CGCTGTACGT GAGTGAGAAG ACGGTGGAGG CCAACCTGTC GCGCGTCTAC
CGCAGGCTGG GCATCCGTTC CCGCGGCGAG CTCGCCAGGG TGCTCAACGC CGAATCCTGA
 
Protein sequence
MPLQLISRDA ELSAVDDLLS AVPTGTCVLV LEGDVGIGKS TVWRAGIERA RTRGFRVLAA 
HPVSSESVAA YSSLAELLAD VDTEVLDHLP APQRVAIDRV LSRADDTGPG TDQRAVAAAV
RSVLERLAHD SPVLVAIDDL QWLDPPTAAV LASVARRSAG AIGFLVTVRS GAGDHTETLL
EPSRPERLHR ARVHPMTVGG LHAMISHQLG RSLTRPRMDW VYEVSAGNPL YALELARALD
RDATGVGPLP ATLADLVRTR ISGLPDHTRE VLLATACIAS PTVDLVARAV GDNVEWTVAA
LEEAERHGVV EITGYKVTFS HPLLARGVYA EASADERRWM HRRLADIVES PESRARHRAL
SSDGADEQTV KALDEAAESV HLRGAPATAA ELLDMARARG GDTPERTLRA AACHFEAGDA
ARARVLLEHA LSEIPPGELR ARALQLLGLV RLYANSSSEA VPMLEQAIAE PGVNPDRRVH
MLVMLAFIEF NAGRADRAVQ RAEEAVTQAM TLHRPDLITQ AKPIRALLRF LLGEGFDEAE
LDGVFDFDEP EGLPLAAQPR TLHALLMLWT DRLDEAADQF NAIAQRCIER GDESERAFVD
FHLGQVNVWR ADLAAAERVA EDSVERALQS HGDLPLFVAL IVRVMVSAHF GREDQTRRFA
AQARTVGERC ESSRLGVWLT TSLGFLELSL GDHRAAVDVL SPAVEGWSSA ATGIPAPTEL
VTAPFLPDAA EALIGIGRLD EAERLVEALE ANGTRLDRPW MLALGARCRA LLLAARGDLT
AAVRAGERAL TEHGRLSMPF ELARTQLVVG RLQHRRRQYD AATATVSTAL AAFERIGAEL
WARQARAELD ALTGRQTAAG LAESERRFAD LAVQGMTNRE IAATLYVSEK TVEANLSRVY
RRLGIRSRGE LARVLNAES