| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_0569 |
|---|
| Symbol | |
|---|
| ID | 4615113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | - |
|---|
| Start bp | 625587 |
|---|
| End bp | 626834 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 639790244 |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_936575 |
|---|
| Protein GI | 119866623 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.26617 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00748263 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAACCCAC CCGGCGGGCC GGCGCTGTCG AGACGACTCG GTCTCGTCGA CGCGATCGTC
ATCGGCCTGG GCGCCATGAT CGGCGCCGGC ATCTTCACCG CGCTCGCGCC TGCGGCGGCC
GCCGCCGGTG GCGGCCTGCT GGTGGGGCTG GCCGTGGCGG CGGTCGTCGC GTACTGCAAC
GCCACCTCCT CGGCGCGCCT GGCCGCGCGT TATCCGGAAT CCGGCGGCAC CTATGTCTAC
GGCCGGGAGC GACTGGGCCC GTTCTGGGGA TATCTGGCGG GTTGGGGGTT CGTCGCGGGG
AAGACCGCCT CGTGCGCGGC GATGGCGCTG ACCGTCGGCG TCTATGTCTG GCCCGGTGGC
GCCCGCCTGA TCGCGGTCGC CGCCGTGGTC GCGCTCACCG CGGTCAACTA CGCGGGCATC
CGGAAATCGG CGCTGCTCAC CCGCCTCATC GTCGCGGTCG TCCTGGCGGT GCTGGCCGTC
GTGGTGGTGA TCGTCCTGGG GTTCGGGGAT CCTGTCGGCG ACCGGTTGGA CTTCGGGGCG
GACGTCACGG TCGGCGGCGC ACTCCAGTCG GCCGGCCTGT TGTTCTTCGC GTTCGCCGGA
TACGCCCGCA TCGCCACCCT GGGCGAGGAG GTATGCGACC CGGCGCGCAC CATCCCCCGC
GCCATCCCGA TCGCGCTGGG CCTCACGTTG GCGGTCTACG CCGTCGTGGC GGTCACCGTG
CTGGCCCAGT TGGGACCCGC GGCGCTGGCC GGCTCGACGG CGCCACTGGC CGATGCGGTC
CGGGCGGCCG GGTTCCCGGG CTGGGTCCCT GTCGTGGGCG CCGGCGCCGC GGTCGCCGCG
CTCGGCTCGC TGCTCGCGCT GATTCTCGGC GTCTCGCGCA CGGCGCTGGC GATGGCGCGC
GACCGTCACC TGCCGTCCGG GTTGGCCGCC GTGCACGCCC GCCACGGCAC CCCGCACCGC
GCGGAGGTCG CGGTGGGCGT GCTGGTCGCC GCGCTGGCGG CGACGGTGGA TCTGCGCGAC
GCGATCGGCT TCTCGTCGTT CGCGGTGCTG ATGTACTACG CGATCGCCAA CGCGTCGGCG
TGGACGCTCG GCGCCCGGGT GGTGCCGGCG GTCGGACTGG CCGGCTGCCT GCTGCTGGCG
TTCGCGCTGC CGTGGACGTC CGTGCTCGCC GGCGTCGCCG TGCTCGCGGT GGGCGCGCTG
GCCTATGCGG TACGCCGCGC GCGGAGCACC GGCAACGGTG CAAGATAG
|
|---|
| Protein sequence | MNPPGGPALS RRLGLVDAIV IGLGAMIGAG IFTALAPAAA AAGGGLLVGL AVAAVVAYCN
ATSSARLAAR YPESGGTYVY GRERLGPFWG YLAGWGFVAG KTASCAAMAL TVGVYVWPGG
ARLIAVAAVV ALTAVNYAGI RKSALLTRLI VAVVLAVLAV VVVIVLGFGD PVGDRLDFGA
DVTVGGALQS AGLLFFAFAG YARIATLGEE VCDPARTIPR AIPIALGLTL AVYAVVAVTV
LAQLGPAALA GSTAPLADAV RAAGFPGWVP VVGAGAAVAA LGSLLALILG VSRTALAMAR
DRHLPSGLAA VHARHGTPHR AEVAVGVLVA ALAATVDLRD AIGFSSFAVL MYYAIANASA
WTLGARVVPA VGLAGCLLLA FALPWTSVLA GVAVLAVGAL AYAVRRARST GNGAR
|
|---|
| |