Gene Mkms_0496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_0496 
Symbol 
ID4615199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp546938 
End bp548101 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content72% 
IMG OID639790171 
Productglycoside hydrolase family protein 
Protein accessionYP_936502 
Protein GI119866550 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4833] Predicted glycosyl hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.66633 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAGC TGTGGGCAAA CCGGGCGGCC AGCGCCGAGG CGGCGATCAC CCAGCGGCAT 
CTGCGTCGCC TCTGGGGGCT GCCGGGCACC CAACTCGGCG TGGTGGCCTG GCCGGCGGCC
GGACCGCACA AACAGTTCCG TACGTGGCAT TACTGGTGGC AGGCCCACCT GCTGGACTGC
CTCGTCGACG CGCAGCTGCG CGAACCCGAC CCGGACCGCC AACGGCGCAT CACCCGCCAG
ATCCGCGCGC ACCGCATCCG CAACATCGGT CGCTGGACCA ACGACTACTA CGACGACATG
GCGTGGCTGG CGCTCGCGCT GGAACGCGCG GGCCGGCTCG CCGGCGTGGC CCGACCCCGC
GCCCTGGGAA CGCTGTGCGA GCAGTTCCTC AACGCCTGGG TGCCCGAGGA CGGCGGCGGC
ATCCCCTGGC GCAAACAGGA CCAGTTCTTC AATGCGCCCG CCAACGGACC GGCAGGCATC
TTCCTGGCGC GTTACGACAA CCGGCTGCGG CGTGCGCAGC AGATGGCGGA CTGGATCGAC
GAGGTGCTCA TCGACCCGGA CACCCAGCTG GTGTTCGACG GCATCAAGGG CGGATCGCTG
GTGCGGGCCC AGTACACCTA CTGCCAGGGT GTGGTCCTCG GGTTGGAAAC CGAGCTCGCG
GTGCGCATCG GCGGTGACGA CGGGGGCGGT GAGCACGCCC TGCGGGTGCA CCGACTGGTC
GCGGCCGTCG CCGAACACAT GGCCCCCGAC GGCGTCATCA AGGGAGCCGG CGGCGGCGAC
GGTGGCCTGT TCAACGGCAT CCTCGCGCGC TACCTTGCAC TGGTCGCCAC CACGCTGCCG
GGTGACACCG CCGATGACGT CGCGGCCCGC GACACCGCGC GGCGGATCGT GCTCGCCTCG
GCCGAGGCGG CGTGGGGGAA CCGGCAGACC GTCGGGGCCG ACGGGGGCGC GCTCCCGCTG
TTCGGGGCCT TCTGGGAGCG CACCGCGGAG CTTCCCACCG CGGCGGGTCG GCAGGCCGAA
TCGGTCGAGG GCGCGGTGAA CGCCTCGGAG ATCCCCGAAC GCGATCTGTC GGTGCAGCTC
TCGGGATGGA TGCTCATGGA GGCCGCGCAC GCGGTGAGCG ATCAGCCCGC GGAGTCCGCT
GATCCGGGGC CCGCCGAAAC GTGA
 
Protein sequence
MDQLWANRAA SAEAAITQRH LRRLWGLPGT QLGVVAWPAA GPHKQFRTWH YWWQAHLLDC 
LVDAQLREPD PDRQRRITRQ IRAHRIRNIG RWTNDYYDDM AWLALALERA GRLAGVARPR
ALGTLCEQFL NAWVPEDGGG IPWRKQDQFF NAPANGPAGI FLARYDNRLR RAQQMADWID
EVLIDPDTQL VFDGIKGGSL VRAQYTYCQG VVLGLETELA VRIGGDDGGG EHALRVHRLV
AAVAEHMAPD GVIKGAGGGD GGLFNGILAR YLALVATTLP GDTADDVAAR DTARRIVLAS
AEAAWGNRQT VGADGGALPL FGAFWERTAE LPTAAGRQAE SVEGAVNASE IPERDLSVQL
SGWMLMEAAH AVSDQPAESA DPGPAET