Gene Mkms_0425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_0425 
Symbol 
ID4615127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp469026 
End bp469877 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content67% 
IMG OID639790100 
Productglycoside hydrolase family protein 
Protein accessionYP_936432 
Protein GI119866480 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2273] Beta-glucanase/Beta-glucan synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0942551 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.978104 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGTC GGAGTGCAAT GTTGATGTTC GGGGTCGGTG TGGCGGCTGC CGCGCTACCG 
GTTGCCAAGG CCGGTGCCCA ACCGGTGATC GGTGATACGC CGCCCGGACC GGGTGTTCCC
GAGGCCGGCG TACCCGGTCT CCTGTTCTCA GACGAGTTCA ACGGACCGGC AGGGGCGCCG
CCGAACCCCG CGTCGTGGTT CATCGTCCCG GCCAGGGAGA CCATCCGGAA CCCCGTCGAA
TGGGACAAGC CCTTCAACAT GGGCCGCTAC GTCACCGATC AGGAGCACGT CTTCCAGGAC
GGGGCGGGCA ACCTGGTCAT CCGGGCCACC CGCGGCCCCG GTGCGAACAT CCAGGAGAAG
TACGCCAGCG GGAAGGTCAT CGGCAACTGG CGCGGCGGTG TCGGGACGAC GTGGGAAGCC
CGCATCAAGC TCAACTGTCT GACCGACGGC GCGTGGCCGG CGTTCTGGTT GATCAACGAC
AACCCGGTGC GCGGCGGCGA GGTCGACCTC GTGGAGTGGT ACGGCAACCG GGACTGGCCC
TCGGGCACCA CCGTGCACGC GCGGTTGGAC GGCACGCAGT TCCAGACCCA CAAACACCCC
GTCGACAGTG ACTGGCACAC CTGGCGGATG ACCTGGCAGC CGCAAGGCAT GTACTTCTGG
AAGGACTACC AGCCGGGGAT GGAGCCGTTC TTCACCGTGC TGGCGAACTC CCTGCCGGAA
TGGCCGTTCA ACGACCCCGG CTACACGATG GCCCCGGTCT TCAACATCGC CGTCGGCGGC
TCCGGCGGTC GCGAGCCGGC CGGCGGCAAC TACCCCGCGG AGATGCTGAT CGACTGGATC
CGGGTCTTCT AA
 
Protein sequence
MDRRSAMLMF GVGVAAAALP VAKAGAQPVI GDTPPGPGVP EAGVPGLLFS DEFNGPAGAP 
PNPASWFIVP ARETIRNPVE WDKPFNMGRY VTDQEHVFQD GAGNLVIRAT RGPGANIQEK
YASGKVIGNW RGGVGTTWEA RIKLNCLTDG AWPAFWLIND NPVRGGEVDL VEWYGNRDWP
SGTTVHARLD GTQFQTHKHP VDSDWHTWRM TWQPQGMYFW KDYQPGMEPF FTVLANSLPE
WPFNDPGYTM APVFNIAVGG SGGREPAGGN YPAEMLIDWI RVF