Gene Mkms_0343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_0343 
Symbol 
ID4615226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp378087 
End bp378896 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content66% 
IMG OID639790018 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_936350 
Protein GI119866398 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.890109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.441011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCACACT CCGCTGAGAC GAACGCCGAT GCCTACGAAC GGGTGCGGCA CGCATACACC 
GATGTGATGG GTGTCGCGGC GCCCGAACCG CATTCCTCCG CCATGGCGCG GTTGTACGAT
TTCGTCTTCG CCGAGGTGTG GCAGCGCCCG GTGCTGAGCC GTCGCGACCG GCGCTTCATC
ACGCTGGCCT GCGTGGCCGC CGCCGACGCC GAGACGCCGC TTCGCGACCA TGTCTACGCC
GCCCTCAGCA GCGGGGACGT GACGATAGCC GAAATGCAGG AAATGGTATT GCATTTCGCT
GTATACGCCG GATGGCCGAA GGCCTCCCGG TTCAACATGA TCGTCGACGA ACTCTGGGAA
CGCATCCACG CTGAGCGCGG CCACCAGCTG CCGTCGCCCG AACCTCTGCT GCCGCTGACC
ACGCCCAGCG ATCCCGAGGA CCGGCTCGCC GTCGGTGAGC AGGCCTTCAA GGACGTCAAC
TGTCTGGCGT TCGCGCCGAC ACGCGACAAC CCTTTCTCCG GGGCGGGCAT CCTGAACTTC
GTTTTCGGCG AGGTGTGGCT GCGGCCCGGC CTGGGGATGA GGGAACGCCG GTTGATCACC
GTCACCTGCG TGGGGTTCCA GGATGCGCCG TACCCGATCG TGAGCCACGT GTATGCCGCG
CTCAAGAGCC GCGATCTGTC CTTCGACGAG ATGGATGAAC TGGCACTGCA TTTCGCGGCG
CACTACGGCT GGCCCAAGGC GGCCCACCTG GCCGAGGCCA TTCGTGAACA GAAGCAGCGG
GTCACCGCCG AGTGGGCCGA CACCGGTTAG
 
Protein sequence
MSHSAETNAD AYERVRHAYT DVMGVAAPEP HSSAMARLYD FVFAEVWQRP VLSRRDRRFI 
TLACVAAADA ETPLRDHVYA ALSSGDVTIA EMQEMVLHFA VYAGWPKASR FNMIVDELWE
RIHAERGHQL PSPEPLLPLT TPSDPEDRLA VGEQAFKDVN CLAFAPTRDN PFSGAGILNF
VFGEVWLRPG LGMRERRLIT VTCVGFQDAP YPIVSHVYAA LKSRDLSFDE MDELALHFAA
HYGWPKAAHL AEAIREQKQR VTAEWADTG