Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mkms_0340 |
Symbol | |
ID | 4615223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. KMS |
Kingdom | Bacteria |
Replicon accession | NC_008705 |
Strand | - |
Start bp | 375194 |
End bp | 376033 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639790015 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_936347 |
Protein GI | 119866395 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.230945 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGGGC GAGTCGACGG CAAGGTCGCG TTCATCACGG GTGCCGCGCG CGGTCAGGGC CGCAGTCATG CGGTGCGGCT CGCCGAGGAG GGCGCCGACA TCATCGCCGT GGATGTGTGC GGTCCGATCA GCAGCCACAC CGACATCCCG CCCGCCACAC CCGACGACCT CGCCCAGACC GCGGATCTGG TCAAGGGACT GAACCGCCGG ATCGTCACCG CCGAGGTCGA CGTCCGCGAT TTCGATGCGC TCGACGCGGT CGTCCGCAGC GGCGTCGAGC AACTCGGTCG GCTCGACATC GTGGTGGCGA ACGCCGGGAT CGGCAACGGG GGCCAGACCC TGGACAAGAC CAGCGAGGAC GACTGGCGTG ACATGATCGA CGTCAACCTG TCCGGCGTCT GGAAGACGGT CAAAGCCGCT GTGCCGCATC TGCTCTCGGG AGGCCGCGGC GGATCGATCA TCCTCACCAG CTCGGTGGGC GGGCTCAAGG CATATCCGCA CACCGGCCAC TACATCGCGG CCAAGCACGG CGTGATCGGG TTGATGCGGA CCTTCGCGGT CGAGTTGGGG CAGCATTCGA TCCGGGTCAA CGCGGTGTGC CCCACCAACG TCAACACCCC GCTGTTCATG AACGAGGGGA CGAAGAAGCT GTTCCGGCCC GATCTGGAGA ACCCCGGCGT CGACGACCTC GCCGTGGCAG CGCAGTTCAT GCACGTGCTG CCCGTGGGCT GGGTCGAGCC GATCGACATC AGCAACGCCG TGTTGTTCCT CGCCTCCGAC GAATCCCGTT ACGTCACCGG GCTACCCGTC ACCGTCGACG CCGGTAGCAT GCTCAAGTAG
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Protein sequence | MGGRVDGKVA FITGAARGQG RSHAVRLAEE GADIIAVDVC GPISSHTDIP PATPDDLAQT ADLVKGLNRR IVTAEVDVRD FDALDAVVRS GVEQLGRLDI VVANAGIGNG GQTLDKTSED DWRDMIDVNL SGVWKTVKAA VPHLLSGGRG GSIILTSSVG GLKAYPHTGH YIAAKHGVIG LMRTFAVELG QHSIRVNAVC PTNVNTPLFM NEGTKKLFRP DLENPGVDDL AVAAQFMHVL PVGWVEPIDI SNAVLFLASD ESRYVTGLPV TVDAGSMLK
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