| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_0286 |
|---|
| Symbol | |
|---|
| ID | 4615342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | + |
|---|
| Start bp | 322628 |
|---|
| End bp | 323653 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639789961 |
|---|
| Product | virulence factor Mce family protein |
|---|
| Protein accession | YP_936293 |
|---|
| Protein GI | 119866341 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.650731 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.237761 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCGGC TGGGCCCCAC GGTGGTCAAG TTCGGGGTGT TCGCCGTGGT GATGGTGCTG
TTCACCGCCG CGCTGGTCGC GATCTTCGGC CAGTACCGTG CCGGATCGGC CAACGAGTAC
TCCGCGGTGT TCGGCGATGC ATCGAGCGTG AAATCCGGTG ACTCCGTGCG TATTGCGGGT
ATCCGGGTCG GCACGGTCAA CGGTGTCTCC CTGCAACCGG ACAATACGGT CGTGGTCGAC
TTCGACGCCC GCACCGACGT CGTGCTGACC ACCGGGACGA GGGTGGCCGT GCGCTACCTG
AACCTCGTCG GTGACCGCTA CCTCGAACTC GTCGACGGCC CCGGCGCGAC GCAGATCCAA
CCCGCCGGGT CGCGGATTCC CAAGGACCGC ACCGAACCCG CGCTCGACCT CGACCTGCTC
CTCGGCGGCC TCAAACCGGT GATCAGGGGA CTGAATCCCG AGGACGTCAA CGCGCTGACC
CACTCGCTGA TCCAGATCCT GCAGGGTCAG AGCGGGGACA TCGAGTCCCT CTTCGCCAGG
ACCTCGTCGT TCACCAACTC CATCGCCGCC AACGGTGAGA CTGTCCGGCA GATGATCGAC
CACCTCAACA CCGTGGTCGA GACCATGTCG CGCGACGGCG ACAAGTTCTC CGGCGCCGTC
GCGCGACTCG AGGAACTCGT CACCGGCCTG GCGCAGGACC GCGATCCCAT CGGTGCGGCC
ATCGAATCCC TCGACAAGGG CACCGCATCG CTGGCCGACC TCATGACCGA GGCGCGCCCC
CCGCTGGCCG GATCCATCGA CCAGCTCAAC CGGGTTGCGC CGCTGCTGGA GAAGGACAAG
GAGCTGCTCG ACATCTCCCT GCAGAAGGCC CCGGGCAACT ACCGCAAGCT GGTGCGCCTC
GGCGCCTACG GCAGCTGGCT CAACCAGTAC CTCTGCGGGC TGTCCGTACG AGTCACCGAT
CTGCAGGGGC GCACCGCCTA CTTCCCCTGG ATCAAGCAAG ACACCGGAAG GTGTGCTGAG
CCCTGA
|
|---|
| Protein sequence | MRRLGPTVVK FGVFAVVMVL FTAALVAIFG QYRAGSANEY SAVFGDASSV KSGDSVRIAG
IRVGTVNGVS LQPDNTVVVD FDARTDVVLT TGTRVAVRYL NLVGDRYLEL VDGPGATQIQ
PAGSRIPKDR TEPALDLDLL LGGLKPVIRG LNPEDVNALT HSLIQILQGQ SGDIESLFAR
TSSFTNSIAA NGETVRQMID HLNTVVETMS RDGDKFSGAV ARLEELVTGL AQDRDPIGAA
IESLDKGTAS LADLMTEARP PLAGSIDQLN RVAPLLEKDK ELLDISLQKA PGNYRKLVRL
GAYGSWLNQY LCGLSVRVTD LQGRTAYFPW IKQDTGRCAE P
|
|---|
| |