| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_0280 |
|---|
| Symbol | |
|---|
| ID | 4615336 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | - |
|---|
| Start bp | 316815 |
|---|
| End bp | 317780 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639789955 |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_936287 |
|---|
| Protein GI | 119866335 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0971022 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCAACTG CCTGGTCGCG GCGCAACTTC CTGGCCATGA CCGCCACGCT CGCCGGTTCG
ACGGTGCTCG CCGGCTGCGG GGGCGACGCG CCCGGCACCG TCGCGAAGGA CGGCTCCGTC
ACCGTCACGC ACGCCTTCGG CGAGACCCGC ATCCCCGGGC CGCCCACCCG CGTCGTCAGC
GCCGGACTCA CCGAACAGGA CGACCTGCTG GCCGTCGAGG TCGTGCCGAT CGCCGTCACC
GACTGGTTCG GCGGTGAGCC GTTCGGCGTA TGGCCATGGG CGCGAGGCCA ACTCGGGCCC
GCTCAGCCGA CGGTGCTCAG CCTCGGCGAC GGTATCCAGA TCGAGGCGAT CCGCGCGCTG
AACCCCGACC TGATCGTCGC CACCAACGCC GGCCTGGACG CCGACACCTA CACGACGCTG
TCGGAGATCG CGCCGACGGT GGCGCAGAGC GGGTCCGCCG CATTCTTCGA GCCGTGGAAG
GACCAGGCCA CGATCATCGG CCAGGCGGTG TTCAAGGCCG ACGAGATGGC GGCGCTGATC
GCCCGCGTCG ACGAGAAATT CACCAACGCG GCCTCGGCCA ATCCACAGTT CGGCGGAAAG
AAGGCGCTGC TGCTGCGCGG CCCGCTCTAC CGCGACAGCG TCCAGGCCGT ACGCCCGGGT
TGGCGCACCG ACTTCCTCAC CCAGATGGGC TTCACCGTCG CCGACCCCGG CGATCCGCTG
ATCCCCCGCG ACCGGATGGC GTCGGTGCTC GACGCCGCCG ACGTCCTCAT CTGGACGACC
GAGAGCGAAC AGGAACAGGG CGCGCTGCTC GCCGATCCGA CCATCGCGGG TCTGAAAGCC
GTCGCGGGTG GGCGCACCAT CTTCACCGAC AAGGAACTCG CCGGGGCGAT CGCGTTCGCC
TCCCCGCTGT CCTATCCGCT GGTCGCCGAC CGGCTGCCGC CGCTGCTCGC GCAGATCCTG
GCCTGA
|
|---|
| Protein sequence | MSTAWSRRNF LAMTATLAGS TVLAGCGGDA PGTVAKDGSV TVTHAFGETR IPGPPTRVVS
AGLTEQDDLL AVEVVPIAVT DWFGGEPFGV WPWARGQLGP AQPTVLSLGD GIQIEAIRAL
NPDLIVATNA GLDADTYTTL SEIAPTVAQS GSAAFFEPWK DQATIIGQAV FKADEMAALI
ARVDEKFTNA ASANPQFGGK KALLLRGPLY RDSVQAVRPG WRTDFLTQMG FTVADPGDPL
IPRDRMASVL DAADVLIWTT ESEQEQGALL ADPTIAGLKA VAGGRTIFTD KELAGAIAFA
SPLSYPLVAD RLPPLLAQIL A
|
|---|
| |