| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_0256 |
|---|
| Symbol | |
|---|
| ID | 4615312 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | + |
|---|
| Start bp | 292051 |
|---|
| End bp | 295047 |
|---|
| Gene Length | 2997 bp |
|---|
| Protein Length | 998 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639789931 |
|---|
| Product | transport protein |
|---|
| Protein accession | YP_936263 |
|---|
| Protein GI | 119866311 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2409] Predicted drug exporters of the RND superfamily |
|---|
| TIGRFAM ID | [TIGR00833] Transport protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.321706 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00659163 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCGGT TAGCCGATCT GGTGGTGCGG TGGCCCTGGG TGGTGATCGG GGTCTGGGTG
GCGATGGCCG TCGCCCTGCC GCTGTCGTTT CCCTCCCTCG GCGAGATGGC CCAGAAGCAT
CCGCTCGCGA TCCTGCCCAG CGATGCGCCG TCGAGCGTGG CCGCGCAGAA GATGGCGGAG
GCGTTCCAGC AGTCCGAATC GGACAACCTC CTCGTCGTCG CCTTCATCAA CGAGACGGGG
CTCGAGCCGG CCGACGAGGT GACCTACCGC GAGGTCGTCG ACGCGCTGCG CGACGACCCC
GCCGACGTCG TGTCGGTGCA GGACTTCGTC AGCACGCCGC AGCTGCGCCA GTTCCTGACG
AGCGAGGACA AGACCACCTG GGTCCTGCCG GTCAGCCTCC AGGGTGAGCT GGGCACACCG
CGGGCCTTCG ACTCGTTCAA CCGGGTGTCC GACGTCGTCG AACACAAGCT CCCCGACGGC
GACACGCTCG ACGTGTACCT GACCGGCCCC GCAGCCACCG TCGCCGACCT CACCGTCGCC
GGTGAGCGGG ACCGGCTGCC CATCGAGATC GCGATCGCCG TCCTGGTCCT CGGGGTGCTG
CTGCTCGTCT ACCGCAGCGT GGTGACGATG CTGCTGCCGT TGGTGACGAT CGGATCGTCG
CTGATGATCG CGCAGGGCGT GGTGGCCGCC TACTCGCACC TGACCGGCTC GGGGGTGTCG
AACCAGTCGA TCGTGTTCCT CAGCGCGATC ATGGCCGGCG CCGGAACGGA CTACGCGGTC
TTCCTGATCA GCCGCTATCA CGACTATCTG CGGTCAGGTT CCGGCTTCGA TGAGGCGGTC
AGGTCGGCGA TGATCTCGAT CGGCAAGGTG ATCACCGCGT CCGCGGTCAC CGTCGGCCTC
ACCTTCCTCG TCATGAACTT CGCCCAGATG GGGGTGTTCA AGACGATCGG GGTGTCCGCG
GCGATCGGCA TCGGTGTCGC CTACCTGGCC GGGATGACGC TGCTGCCGGC GATCCTGGTG
CTCGCCGGGC CGCGCGGTTG GGTGAAACCG CGGCGGGAGC TGACCTCCCG ATTCTGGCGA
CGCTCGGGAA TCCGCATCGT CCGCAGGCCG GTGCCGCATT TGATCGCCAG CGTGCTGGTG
TTGCTGCTGC TGGGCGGCGC CGCGGGCTTC GCGCGATTCA ACTACGACGA TCGCGAGGTC
GTCGCCGACT CGGCGCCGAG TTCGATCGGG TACGCCGCAC TGGAACGTCA TTTCCCGATC
AGTCAGTCCA TCCCGCAGTA CATCCTCGTG CAGTCGCCGC GCGACCTGCG CACCCCACAG
GCGCTGGCGG ACCTGGAGCA GATGGCCTCG CGGATCGCAC AGTTGCCCGA CGTATCCCTG
GTCAGCGGCG TCACCAGACC GCTCGGAGAG GTACCGCCGG AGTTCCGCGC CACGTTCCAG
GCGGGCATCG TCGGTGACCG GCTGGCCGCC GGTTCCGCCC AGATCGACCA GCGCACCGGT
GACCTCGACG AACTGGCGGC CGGGGCGACG ACACTGGCCG ACACCCTCGG CGACGTGCGC
GCACAGGTGA ACGAGGTCGC CCCGAGCCTG CAGACGCTGC TGGACGCGGT CACGCAGGTG
CGTGTCGAGT ACGGCGGCGA CCGGTTGGTG CGCGACGTCG ACACCGCCGC CAAGCTGGTC
AAGAGCGTCA ACGAACTGGG CCTGTCCATG GGCGTCAACT TCGCCGCCGT CAGGGACATG
TTCGGCTGGA TCGGCCCGGT CCTGATGGCG TTGAACGGCA ACGCGGTCTG CGACGCGAAT
CCCTCCTGCG TCAACACCCG CATGCAGTTC GAGAAGCTGA TGGACGCGCG TGAGGACGGC
CGGCTGGAGC GGATCAACAC CCTTGCCGGA GAACTGGAGG GTCTCGACGA CAGGCAGTCG
CTGAACTCGA CGGTCAAGAC GCTGAACGCC GCGATGACGA ACATCGTCAA GGCCGTCGAC
GACCTCGGCC TGGATTCGCC GGCCGAGGCG CAGAAGGGTC TGCGAGACGT CCGGCAGGGC
GCCGACCGGC TGGCCAGCGG AAGCCGGCAG GTGGCCGGCG GCGTCGATGA ACTCGTCGAG
CAGATCAAGG TGATGGCCGA CGGTCTCGAC CAGGCGTCGA CGTTCCTGTT GACGATGCGC
AAGGATGCGG CGGGCTCGTC GATGGCCGGG TTCAACATCC CCGCCGAGGT GCTCAGGGCG
GTGGAGTTCC AGAAGGCCGC CGAAACCTTC ATCTCGCCGG ACGGCCATTC GGCGCGGTAT
CTCGTGCAGA CCAGTCTCAA CCCCTTCAGC CCCGAGGCCA TGGATCAGGT CAACACGATC
AACGACGTCG CCCGGGGTGC CCAACCGAAC ACCACACTGG CCGACGCCTC GATCTCGATG
GGCGGCTTCC CCGCCTCGCT GCGCGACACC CGCGACTACT ACGAGCGCGA CATCCGCTTC
ATCATCATCG TGACCCTCAT CGTGGTCCTG TTGACGTTGG CGGTGCTGCT GCGTTCGCTC
ATCGCCCCGC TCTATCTCGT CGGTTCGGTG GTGCTGTCGT ATTTCGCGGC GATCGGCATC
GGGGTCCTGA CGTTCCAGGT GCTGCTCGGC CAGGAGTTGC ACTGGAGTGT GCCGCCGTTG
GCGTTCGTGG TGCTCGTGGC GGTCGGCGCC GACTACAACA TGCTGTTCGT CTCGCGATTG
CGGGACGAAT CGCCGCACAG TGTGCGCTAC GGCGTCATCC GCACGCTGGG CTCGACCGGC
GGGGTGATCA CCGCGGCCGG TCTGATCTTC GCGGCCTCGA TGGCCGGTCT GTTGTTCGCC
AGCATCGGCA TCGTCGTACA GGGCGGTTTC GTGATCGGGG TGGGAATCCT GTTGGACACC
TTCGTCGTAC GCACCATCAC GGTGCCCGCC ATCGCCGCAC TCGTCGGGCG CGCGAACTGG
TGGCCGTCGC GAGTCACCGC ATCGCCCGGC GCCGAGCGGA TCGGTGCGCA CCCGTGA
|
|---|
| Protein sequence | MRRLADLVVR WPWVVIGVWV AMAVALPLSF PSLGEMAQKH PLAILPSDAP SSVAAQKMAE
AFQQSESDNL LVVAFINETG LEPADEVTYR EVVDALRDDP ADVVSVQDFV STPQLRQFLT
SEDKTTWVLP VSLQGELGTP RAFDSFNRVS DVVEHKLPDG DTLDVYLTGP AATVADLTVA
GERDRLPIEI AIAVLVLGVL LLVYRSVVTM LLPLVTIGSS LMIAQGVVAA YSHLTGSGVS
NQSIVFLSAI MAGAGTDYAV FLISRYHDYL RSGSGFDEAV RSAMISIGKV ITASAVTVGL
TFLVMNFAQM GVFKTIGVSA AIGIGVAYLA GMTLLPAILV LAGPRGWVKP RRELTSRFWR
RSGIRIVRRP VPHLIASVLV LLLLGGAAGF ARFNYDDREV VADSAPSSIG YAALERHFPI
SQSIPQYILV QSPRDLRTPQ ALADLEQMAS RIAQLPDVSL VSGVTRPLGE VPPEFRATFQ
AGIVGDRLAA GSAQIDQRTG DLDELAAGAT TLADTLGDVR AQVNEVAPSL QTLLDAVTQV
RVEYGGDRLV RDVDTAAKLV KSVNELGLSM GVNFAAVRDM FGWIGPVLMA LNGNAVCDAN
PSCVNTRMQF EKLMDAREDG RLERINTLAG ELEGLDDRQS LNSTVKTLNA AMTNIVKAVD
DLGLDSPAEA QKGLRDVRQG ADRLASGSRQ VAGGVDELVE QIKVMADGLD QASTFLLTMR
KDAAGSSMAG FNIPAEVLRA VEFQKAAETF ISPDGHSARY LVQTSLNPFS PEAMDQVNTI
NDVARGAQPN TTLADASISM GGFPASLRDT RDYYERDIRF IIIVTLIVVL LTLAVLLRSL
IAPLYLVGSV VLSYFAAIGI GVLTFQVLLG QELHWSVPPL AFVVLVAVGA DYNMLFVSRL
RDESPHSVRY GVIRTLGSTG GVITAAGLIF AASMAGLLFA SIGIVVQGGF VIGVGILLDT
FVVRTITVPA IAALVGRANW WPSRVTASPG AERIGAHP
|
|---|
| |