Gene Mkms_0245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_0245 
Symbol 
ID4615474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp269113 
End bp269976 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content73% 
IMG OID639789920 
ProductRpiR family transcriptional regulator 
Protein accessionYP_936252 
Protein GI119866300 
COG category[K] Transcription 
COG ID[COG1737] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.612405 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCTC CCACCGGTGA GACCGTGGCC GCGTTGGCCG CCGCCGCGCT GCCGGCGTTG 
TCGCGCGCCG AACGGCGGGT GGGTCGGGCG TTGCTGGCCG ACTATCCGAG CGCCGGGCTG
GCCAGTGCCG CGCGGCTCGC CGAACGGGCC GATGTCAGCC CTCCGACCGT ACTGAGGTTC
GCGCATTCGC TGGGCTTCGA AGGGTTCGCC GACCTGCAGG TCTCGCTGCG GGCCGAGATC
TCGGCGATGT CGAGCGGACC GATCACCCGG CTGCCGGACG CGCCCGCCGC GGGCAGCCCG
CTCGACCGGC TGCTCAATCA GGCCCGCGCG CAGAACGACC GCGCGTTGGA AACGCTCGCC
CACCTGCCGG GTTCGTCACT GGAGGCGGCG GTGGCCCTGC TGGCCGACCA GACGCGGCCG
CTCTTCCTGC ACGGCGGCCG GTTCTCGGTG CTGCTGGCCC ACCACCTGGG TGCGCACCTC
GAACAGCTGC GCCCGGGGGT GCGACTGCTC GCCGACCCGT CGGGCCGCGA CCTCGGGGCG
ATGATGGAAC TCACCCGGCG CGACGTGCTG GTCCTGTTCG ACTACCACCG CTACCAGGCC
AGCGCCGTGG ACGTGGCGGC GCGTTTCCAC CGGGCCGGGG CCGCGGTCGT GCTGATCACC
GACGACCTCG CCTGTCCGGT GGCCCCCGAC GCCGAAGTCG TGCTGGCCGC GTCGAGCACC
GTGGGGACGG TGTATCAGAG CATGGCGGCG GGGTTTCTGC TCACCGAACT GCTCCTCCCG
CTGGTGATGG AGGCGATCGG CGAACCCGCG CGCACCCGCA TGGCGCTGTG GGAGGAGCAG
CGCCGCGGCG AACTGCTGCC ATGA
 
Protein sequence
MPSPTGETVA ALAAAALPAL SRAERRVGRA LLADYPSAGL ASAARLAERA DVSPPTVLRF 
AHSLGFEGFA DLQVSLRAEI SAMSSGPITR LPDAPAAGSP LDRLLNQARA QNDRALETLA
HLPGSSLEAA VALLADQTRP LFLHGGRFSV LLAHHLGAHL EQLRPGVRLL ADPSGRDLGA
MMELTRRDVL VLFDYHRYQA SAVDVAARFH RAGAAVVLIT DDLACPVAPD AEVVLAASST
VGTVYQSMAA GFLLTELLLP LVMEAIGEPA RTRMALWEEQ RRGELLP