Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mkms_0148 |
Symbol | |
ID | 4615554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. KMS |
Kingdom | Bacteria |
Replicon accession | NC_008705 |
Strand | - |
Start bp | 163904 |
End bp | 164917 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639789824 |
Product | RNA polymerase factor sigma-70 |
Protein accession | YP_936156 |
Protein GI | 119866204 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02960] RNA polymerase sigma-70 factor, TIGR02960 family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.764524 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.87162 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGCCA TCGTGCGTAA GCTCGCCAGC GTGACCGTCC TGGCTCGTAC CGTCGACGAC GGCCCTGACG AAGACGCATT CCTCGCCGAT GCACAGAAGT ATCGACGGGA ACTGCTCGCG CACTGCTACC GGATGACCGG GTCACTGCAC GACGCCGAAG ACCTGGTGCA GGAGACGTAT CTGCGGGCGT GGAAGTCCTA CAAGGGTTTC CAGGGCAAGT CGTCGGTGCG CACCTGGCTC TACCGGATCG CCACGAACAC CTCGCTGACC GCGCTCGACG GCCGGGCTCG CCGGCCGTTG CCCACCGGCC TCGGTGCGCC CAGTTCCGAC CCGGTCGACG ACATCCACGA ACGCGCCGAG GTGCCGTGGC TGCAGCCGCT GCCCGACGAC GCCGGCGACC CGTCGAGCAT CGTGGGCTCA CGGGAGTCGG TGCGGTTGGC GTTCATCGCG GCGCTGCAGC ACCTCTCCCC GCGGCAGCGC GCGGTGCTGG TGTTGCGCGA GGTGCTGCAG TGGAAGGCCG CCGAGGTCGC CGACGCGCTG GGCACGTCCA CCGCGGCGGT GAACAGCCTG CTGCAGCGGG CGCGGGCCCA ACTCGACGCC ATCGGGCCGA GCGAGGACGA CGACCTGCGC CCCCCGGAGT CTCCGGAGGC CAGGGACCTG CTGACCCGCT ACATCGCGGC GTTCGAGACC TACGACGTCG ACAGGCTGGC CGACCTGTTC ACCGCGGAGG CCGTGTGGGA GATGCCGCCG TTCGACGGGT GGTACCAGGG CCCGCACGAC ATCGTGCTGC TGTCGAAGAC GCACTGCCCG GCCGAACGGG CAGGCGATAT GCAGCTGATT CCGACCACCG CCAACGGGCA GACCGCCGCG GCGCTGTACA TGCGCAATCC GGCGACCGGT CGGCACGAGG CCTTCCAGCT GCATGTCCTC GACGTCACCG CGGACGGCAT ATCGCACGTG GTGGCGTTCC ACGCGACGAC GTTCGCGCCG TTCGGGCTGG CGGACACGCT GTAG
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Protein sequence | MSAIVRKLAS VTVLARTVDD GPDEDAFLAD AQKYRRELLA HCYRMTGSLH DAEDLVQETY LRAWKSYKGF QGKSSVRTWL YRIATNTSLT ALDGRARRPL PTGLGAPSSD PVDDIHERAE VPWLQPLPDD AGDPSSIVGS RESVRLAFIA ALQHLSPRQR AVLVLREVLQ WKAAEVADAL GTSTAAVNSL LQRARAQLDA IGPSEDDDLR PPESPEARDL LTRYIAAFET YDVDRLADLF TAEAVWEMPP FDGWYQGPHD IVLLSKTHCP AERAGDMQLI PTTANGQTAA ALYMRNPATG RHEAFQLHVL DVTADGISHV VAFHATTFAP FGLADTL
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