Gene Mkms_0143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_0143 
Symbol 
ID4615549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp159113 
End bp160396 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content72% 
IMG OID639789819 
ProductSMP-30/gluconolaconase/LRE-like region 
Protein accessionYP_936151 
Protein GI119866199 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2133] Glucose/sorbosone dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.689507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.832483 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATCT GTCTGCCGTA TAAGGCATTC GGCGTTCTCG CCGTTGCGGC GCTGGCCGGG 
TGCTCGACGA GTGCACCCGA CGAGACCGCG CCGTCGCCGT CCACCTCGAC GTCGGCACCT
GCGCCGGCTT CGGCAGATCG GACGGTGACC GTCGAGGTGC CCGCGGGGAT GGATGCCGCA
CCCTTCGACG AAGCCCGCCG GGTGTCGATT CCCGCGGGCT GGACGATGGC GGTATGGGCG
CGGGTTCCGA AGGCGCGGTT CGCCCGGTGG GCGCCCGACG GTGCGTTGCT GGTCTCCGTG
CCCAGCACGG GAGAGATCCT GAAACTCGAC GGATCAGGGT CCACACCGCT GCTCGAGGGA
CTCACCCAGC CGCACGGGAT GGCGTTCGCC GGGTCGACGC TCTACGTCGC CGAGAGTGAC
GAGATATCGG CCTACGACTA CGTCGACGGC AGGGCGGGCA ACCGACGCAC CGTGGCCGCC
GGCCTACCCG ACGCCGAGAG TCCGGACCTG CGGGGCGCCT ACGCGCATGC GCTCAAGAGC
GTCGCGGTCG GACCCGATGG GGCCGTGTAC TTCTCGATCG GGTCGACGGG CAACATCTCG
GCCGAGGACC GCGACGCCAC CCCACCGCGC GCCACCATCA TGCGGGTGCC CCCGGGCGGC
GGTCCGGCCG AACCGTTCGC CACCGGCGTC CGCAACGGCA CCGGGCTGGC GGTCGCGCCG
GACGGTTCGG TGTGGACGGC GGTCAACGGC CGCGACAACG TCGCCGACCC CGCGACCGGT
GAGGTCGACC CGGCCTACGT CAACGACCAC CCGCCCGAAC AGCTCGCCAA GCTCACACCC
GGGCGCGAAC TGGGGTGGCC GTACTGCAAC ATCGACGGTG GACCGGCCGA CGTGCCCTTC
ATCCGCGACG TGCAGACCAA CGCCGACGGC GACAAGCTCG ACTGCGCCGC GCTACCACCG
GTCGAGCAGA GCTTCGGCGC CCACTCCGCT CCGCTGGGCC TGAGCTTCGT CGACGGGGAA
CTGCCCGAAC CGTATGCGCG GGGAGCGCTG GTCGGCATCC ACGGGTCGTG GAACCGGCGG
CCGCCGCGCG CCCCCGAGGT GTCGTTCTAC CCGTGGCGCG ACGGCGGTCT CGGCGATCAG
CAGACGTTGG TCGGCGGGTT CCAGGACGAG GACGGGTCCC GGTGGGGCCG GCCGGTCGAC
GCGGTGGCGG GGCCCGACGG CGCCGTCTAC ATCACCGATG ACGACGCCGG CGCCGTCTAC
CGCCTCGCAC CGCCCGGCCG CTGA
 
Protein sequence
MRICLPYKAF GVLAVAALAG CSTSAPDETA PSPSTSTSAP APASADRTVT VEVPAGMDAA 
PFDEARRVSI PAGWTMAVWA RVPKARFARW APDGALLVSV PSTGEILKLD GSGSTPLLEG
LTQPHGMAFA GSTLYVAESD EISAYDYVDG RAGNRRTVAA GLPDAESPDL RGAYAHALKS
VAVGPDGAVY FSIGSTGNIS AEDRDATPPR ATIMRVPPGG GPAEPFATGV RNGTGLAVAP
DGSVWTAVNG RDNVADPATG EVDPAYVNDH PPEQLAKLTP GRELGWPYCN IDGGPADVPF
IRDVQTNADG DKLDCAALPP VEQSFGAHSA PLGLSFVDGE LPEPYARGAL VGIHGSWNRR
PPRAPEVSFY PWRDGGLGDQ QTLVGGFQDE DGSRWGRPVD AVAGPDGAVY ITDDDAGAVY
RLAPPGR