Gene Mkms_0131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_0131 
Symbol 
ID4615537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp145317 
End bp146465 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content67% 
IMG OID639789807 
Productvirulence factor Mce family protein 
Protein accessionYP_936139 
Protein GI119866187 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID[TIGR00996] virulence factor Mce family protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.307486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.199018 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCACA GGATCCGTCG TCTCGCCACC CGCACGGTCG CGCTCGCCGT GGCCGCGGTG 
GTGCTGACGT CGTGCGGTTC GTGGAAGGGC ATCGCGAACG TGCCGTTGCC CGGCGGTCCG
GGCACCGGCG GCGATGCCAT GACGGTGTAC GTCCAGATGC CGGACACGTT GGCGCTCAAC
GTCAACAGCC GGGTCCGGGT GGCCGACGTC TTCGTCGGGA CCGTCCGCGC GATCGAGCTG
AAGAACTGGG TCGCAACCCT CAAGCTGGGC ATCCAGCCGG GTGTCGAACT GCCGTCCAAC
GCGCTGGCCA AGATCGGTCA GACCAGCCTC CTGGGGTCCC AGCACGTCGA GCTGGAGGCA
CCACCGGATC CGTCGTCGGA GCCGCTTCGC GACGGGGACA CCATCCCGCT GAAGAACGCC
TCGGCGTTCC CCACCACCGA GCGGGTGCTC GCCAGCATCG CGACGATCCT GCGCGGCGGA
GGCATCCCCA ACCTCGAGGT GATCCAGACC GAGGTGAACA ACCTGCTGAC CGGGCGGGCG
GAGCAGATCC GCGAGTTCCT CGGCCGGCTC GACGTGTTCA CCGACGAGCT CAACCAGCAG
CGTGAAGACC TCACCCGCGC CATCGACTCG ACGAACCGGT TGCTCAACAT CGTGGCGAGC
CGCAACGACA CCCTCGACCG TGTGCTCACC GAGTTCCCGC CGCTGATCGA GCACTTCGCC
GAGACGCGGG ATCTGTTCGC CGACGCCGTG ATCGCGGTGG GCCGCATCAG CCGCGCGGCC
GACACCTACC TCGGCCAGGC CCAGGACCCC CTGAACACCA ACCTGCAGAA CCTGCAGCGT
CCGCTCAAGC AGCTCGCTCG TTCCTCGCCG TACCTGATCG GCGCGCTGAA GCTGATGCTG
ACCGCACCGT TCAGCATCGA GAACGTGCCG AAGGTGGTCC GCGGTGACTA CATCAACGTG
TCGCTGAACG TGGACCTGAC GCTGTCGGCA ATCGACAACG GCATCCTCAC CGGCACCGGT
GTGTCGGGCA TGCTCCGGGC GCTGGAACAG GCATGGGGTC GTGATCCGGC GACGATGATC
CCGGATGTGC GCTTCACGCC GAACGCGCAC AGCGCACCGA ACGGACCGCT GGTCGAAAGG
GGTGAGTGA
 
Protein sequence
MKHRIRRLAT RTVALAVAAV VLTSCGSWKG IANVPLPGGP GTGGDAMTVY VQMPDTLALN 
VNSRVRVADV FVGTVRAIEL KNWVATLKLG IQPGVELPSN ALAKIGQTSL LGSQHVELEA
PPDPSSEPLR DGDTIPLKNA SAFPTTERVL ASIATILRGG GIPNLEVIQT EVNNLLTGRA
EQIREFLGRL DVFTDELNQQ REDLTRAIDS TNRLLNIVAS RNDTLDRVLT EFPPLIEHFA
ETRDLFADAV IAVGRISRAA DTYLGQAQDP LNTNLQNLQR PLKQLARSSP YLIGALKLML
TAPFSIENVP KVVRGDYINV SLNVDLTLSA IDNGILTGTG VSGMLRALEQ AWGRDPATMI
PDVRFTPNAH SAPNGPLVER GE