Gene Mkms_0117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_0117 
Symbol 
ID4615523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp130161 
End bp130820 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content67% 
IMG OID639789794 
ProductTetR family transcriptional regulator 
Protein accessionYP_936126 
Protein GI119866174 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0523426 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCCG AAGCCTCGCC GAACGGCTCG ACGCGGCGCG ATGAGCTGCT GAGGGTCGCC 
ACCAAGCTGT TCGCCGCCCG CGGCTACCAC GGCACCCGGA TGGATGACGT CGCCGACGCC
GTCGGCCTGA ACAAGGCCAC GGTGTACCAC TACTACGCGA GCAAGTCGCT CATCCTCTAC
GACATCTACA AAGGCGCCGC CGACTTCACC GTCGACGCAC TGCACGACGA TCCGACGGCG
TCGGCCCGCG AGACGATCTA CCACTTCACC CGCCGGTTGC TCGTCGGCAT CGCCAACGAC
ATCGAGCGCG CCGCCGTGTA CTTCCAGGAG GGCCCCTACA TCGGCGAGTG GTTCACCGAG
GAGCAGGTCG AGTACATCCG CGAGAAGGAG ACCCAGGTCT ACGAGCACGT GCGTGACGTG
ATCGACCGGG GCATCGCCAG CGGCGAGTTC TACGACTGCG ATTCGCACGT GCTGGCGCTC
GGCTACATCG GGATGACGCT GGGCGCCTAC CGCTGGCTGC GGCCCCAGGG CCGGCGCACC
GCACAGGAGA TCGCCGAGGA GTTCAGCACC GCACTGCTGC GCGGGCTGAT CCGCGACGAG
GCGGTGCGCA CCGAGTCACC GCTGGGCGTG GACGTCCGGA CGGGAGTAGG CAGTGACTGA
 
Protein sequence
MSAEASPNGS TRRDELLRVA TKLFAARGYH GTRMDDVADA VGLNKATVYH YYASKSLILY 
DIYKGAADFT VDALHDDPTA SARETIYHFT RRLLVGIAND IERAAVYFQE GPYIGEWFTE
EQVEYIREKE TQVYEHVRDV IDRGIASGEF YDCDSHVLAL GYIGMTLGAY RWLRPQGRRT
AQEIAEEFST ALLRGLIRDE AVRTESPLGV DVRTGVGSD