| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_0046 |
|---|
| Symbol | |
|---|
| ID | 4615613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | - |
|---|
| Start bp | 54440 |
|---|
| End bp | 56311 |
|---|
| Gene Length | 1872 bp |
|---|
| Protein Length | 623 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639789723 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_936055 |
|---|
| Protein GI | 119866103 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00847244 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCGC ATGCGGTGCC GTCGGCGGCC ACGCACGGCG GCGGCTGGTT TACGAAACTT
CCTGTGCTAC CGAATGCCGC CGGGGCCAGC GCGATCGCAC TTGCGGCGAC GCCTGCGAAC
AACGCGGGGG CGGCGGCTTT ACTCATTTTG TTTCGCATGA CTAAGGCTTT GCCGCCGTCA
CTGATCTTCA AACCACCCCG ATTGGTGACG CGTTCGACAA TGCCTCGGTT GGCCGGTTGC
GGTTTGGCGC AGGCCCGCCG CGGCTATGCC CGTCCGGAAG ACGGATGCGT TGAGCTGACG
AGGTGCTGGA CTGTGACGAC TATCGAGCAT CAGGATCCGG GGGCTTCGGC AGAGTGGCCG
ACGCAACCGC TTCCTGCTCC GGGACGCGCG CTCAATCCCG CGACCACCCA GGTACCCGGA
TGCATCGTCG GCGGTCGCTA TCGGCTTCTC GTCTGTCACG GCACCTCCGG GGTGCTCGAA
TTCTGGCAGG CCGTCGACCT GGCCGCGGGT CGTGCGGTGG CGGTGACGCT GGTGGATCCG
CGCTCGAGCC TGCCGATCGA ATGGGTCAAC GAAATTCTGT CGCTCACCGT CCGACTGCGC
GGGGTCGACG CACCCGGTAT CGCGACGATC CTGGACGTCC TCCATACCGG GCAATGCGGT
GTCGTCGTGG CGAATTGGGT GGCCGGGGGC AGTCTGCGGG AAGTGGCGGA CACCGACCCT
GCGCCGGAAG CCGCCGCCGC AGCGCTGGAA TCGCTCGCCA TGGCCGCCGA GGCCTCACAT
CGCGCCGGTA TGCACCTGAG TATCGACCAT CCGGCACGCG TCCGGATCAG TTCGGACGCC
CGCGCGGTGC TGGCGTTCCC GGCGACCCTG CCCGACGGCA CACCGCACAC CGACCTGCGC
GGTATCGGTG GTTGCCTCTA CGCGCTGCTC GCGAAATGTT GGCCCGAAGA CGTGTCGGAA
CCCGCGCAGT TGGCCGAGCT GCGACCTGGG ACACCGTATT TGGTGTCGGC GACGGCCTCC
GGTCTGGCGC GGCCCGAACC CGGGATCACG AGTGCCGCGA CAGTTCTGAC GATGCTTCGG
CAGGCCGCGC GCGACGGCCG CGACGACGGT GCCGACATCC GCGTCCTGCC GCCGCTGGAT
CCACCTCCAC CGGGGGTGTA TGCCGCGTTC CGCAACTTCG GACCGGACGA ACAGGCGCAG
GAAGCCCGCA AGAGCGTGCT GCGCGCGACG ATCGGCACCG CCGCGGCGGT CGTCGCGGCG
GGTGTGGTGA TGCTGGGCTC GAGCGTCAAC GAGGTGTTGC AGGCTCCTGA CGAGACCCCG
GCGATGGATG CCGGGCAACT GGGCTTGCAG GACGGCCCGA CGTCGGTCGC ACCGAAGGTC
CCCGAGGAGA CGGTCAAGGC GGCCGCGGCG GATGCGCCGG TCAAGCCGGT GAGGGCGGAG
GTGTTCTCGA CCGACGGCAG GCCGGACAAC CCCGGGGAAG CGGGTCGCGT GATCGACGGC
GACCCAGCCA CCGCGTGGTC GACAGACCGG TACTACGACG CCGATCCCTT CCCCGAGTTC
AAGGAGGGGC TGGGGTTGAT GCTGGAGTTG CCGGCCCCGA CGACGCTCGG ATCGGTCGAG
GTCGATCTCG GGAGCACCGG TACGGTCGTG CAGGTTCGGT CGGCGCCCGG ACAGTCCCCC
GCCGCGCTCG GCGACACCAC GGAGATCAGC GCGCCCACGC CGATGCAGCC GGGCCGCAAC
ACCATTGCGG TGCGCAGCCG TGAACCGGTC AAGCACGTCC TCGTGTGGGT GAGCACCCTG
GGCAGCACCG ACGGCCGCAA TCAAGCCGCG GTCTCCGAGA TCACGCTGCA TCCGCCCGCG
CCGCCGGCGT AG
|
|---|
| Protein sequence | MAAHAVPSAA THGGGWFTKL PVLPNAAGAS AIALAATPAN NAGAAALLIL FRMTKALPPS
LIFKPPRLVT RSTMPRLAGC GLAQARRGYA RPEDGCVELT RCWTVTTIEH QDPGASAEWP
TQPLPAPGRA LNPATTQVPG CIVGGRYRLL VCHGTSGVLE FWQAVDLAAG RAVAVTLVDP
RSSLPIEWVN EILSLTVRLR GVDAPGIATI LDVLHTGQCG VVVANWVAGG SLREVADTDP
APEAAAAALE SLAMAAEASH RAGMHLSIDH PARVRISSDA RAVLAFPATL PDGTPHTDLR
GIGGCLYALL AKCWPEDVSE PAQLAELRPG TPYLVSATAS GLARPEPGIT SAATVLTMLR
QAARDGRDDG ADIRVLPPLD PPPPGVYAAF RNFGPDEQAQ EARKSVLRAT IGTAAAVVAA
GVVMLGSSVN EVLQAPDETP AMDAGQLGLQ DGPTSVAPKV PEETVKAAAA DAPVKPVRAE
VFSTDGRPDN PGEAGRVIDG DPATAWSTDR YYDADPFPEF KEGLGLMLEL PAPTTLGSVE
VDLGSTGTVV QVRSAPGQSP AALGDTTEIS APTPMQPGRN TIAVRSREPV KHVLVWVSTL
GSTDGRNQAA VSEITLHPPA PPA
|
|---|
| |