Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mkms_0014 |
Symbol | gyrB |
ID | 4615578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. KMS |
Kingdom | Bacteria |
Replicon accession | NC_008705 |
Strand | + |
Start bp | 12088 |
End bp | 14115 |
Gene Length | 2028 bp |
Protein Length | 675 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639789688 |
Product | DNA gyrase subunit B |
Protein accession | YP_936023 |
Protein GI | 119866071 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.772791 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.14054 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCTGCCC AGAAGAAGAA TGCTCCGGCC GAGTACGGCG CGGATTCGAT CAAGGTCCTC GAGGGGCTCG AAGCGGTCCG CAAGCGACCG GGCATGTACA TCGGCTCAAC GGGCGAACGC GGTCTCCACC ACCTGGTCTG GGAAGTCGTC GACAACGCCG TCGACGAGGC GATGGCCGGT TTCGCCACCA AGGTCGAGGT GCGGATCCTC GAGAACGGCG GCGTCCAGGT CACCGACGAC GGTCGTGGCA TCCCGGTCGC CATGCACTCC ACCGGCATCC CCACCGTCGA CGTCGTGATG ACCGTCCTGC ACGCCGGCGG CAAGTTCGAA GAGGGCGCCT ACCAGGTGTC CGGCGGTCTG CACGGTGTGG GTGTGTCGGT GGTCAACGCG CTGTCCACCC GGCTCGAGGC CGACATCCGC ACCGACGGGT ACGAGTGGTT TCAGACCTAC GACCGTTCGG TGCCGGGCAC CCTCAAGCAG GGTGAGAAGA CGAAGAAGAC CGGCACGACC ATCCGCTTCT GGGCCGATCC GGACATCTTC GAGACCACCA GCTACGACTT CGAGACGATC GCCCGGCGTC TGCAGGAGAT GGCGTTCCTC AACAAGGGCC TCACCATCGA ATTGACCGAC GAGCGGGTGA CCGCCGAAGA GGTGGTCGAC GACGTCGTCA GCGATCATGC CGAAGCGCCC AAGAGCGCCG AGGAGAAGTC GGCCGAGGCG GCAAAACCGC AGAAGGTCAA GCACCGGGTC TTCCACTACC CGGGCGGTCT GGTCGACTTC GTCAAGCACA TCAACCGCAC GAAGACCCCG ATCCAGCCCA GCGTCATCGA CTTCGACGGT AAGGGCGAGG GCCACGAGGT CGAGATCGCG ATGCAGTGGA ACGCCGGCTA CTCCGAGTCG GTGCACACGT TCGCCAACAC GATCAACACC CACGAGGGCG GCACCCACGA AGAGGGGTTC CGCACGGCGC TGACGTCGGT GGTGAACAAG TACGCCAAGG ACAAGAAGCT CCTCAAGGAC AAGGATCCGA ACCTCACGGG CGACGACATC CGGGAGGGCC TCGCCGCGGT CATCTCGGTG AAGGTGTCCC AGCCGCAGTT CGAAGGCCAG ACGAAGACCA AACTCGGCAA CACCGAGGTC AAGTCGTTCG TGCAGAAGAT CTGCAACGAA CAGCTCAGCC ACTGGTTCGA GGCCAATCCG GCCGAGGCGA AAACCGTTGT GAACAAGGCG GTCTCGTCGG CGCAGGCGCG GCTGGCCGCC CGCAAGGCCC GGGAGTTGGT GCGGCGCAAG AGCGCAACTG ACATCGGCGG TCTGCCCGGC AAGCTCGCCG ACTGCCGTTC GACCGATCCG AGCAAGTCGG AACTGTATGT GGTGGAGGGT GACTCGGCCG GCGGTTCGGC CAAGAGCGGT CGCGACTCGA TGTTCCAGGC GATCCTGCCG TTACGGGGCA AGATCATCAA CGTGGAGAAG GCGCGCATCG ACCGCGTGCT GAAGAACACC GAAGTCCAGG CGATCATCAC CGCGCTGGGC ACGGGTATCC ACGACGAGTT CGACATCAGC AAGCTGCGGT ATCACAAGAT CGTGCTGATG GCCGACGCAG ACGTCGACGG CCAACACATC TCGACGCTGC TGCTGACACT GCTGTTCCGG TTCATGAAAC CGTTGATCGA GAACGGTCAC GTGTTCCTGG CGCAGCCGCC GCTGTACAAA CTCAAATGGC AGCGCAGCAC ACCGGAATTC GCCTATTCGG ACCGGGAGCG CGACGGGTTG CTCGAAGCCG GCCGTGCCGC GGGCAAGCGG ATCAACGCCG ACGACGGCAT CCAGCGCTAC AAGGGTCTGG GCGAGATGGA CGCCAAGGAA CTGTGGGAGA CCACAATGGA CCCGTCGGTG CGGGTGCTGC GCCAGATCAC GCTCGACGAT GCGGCCGCTG CCGACGAACT GTTCTCGATC CTGATGGGCG AGGACGTCGA GGCGCGCCGC AGCTTCATCA CCCGAAACGC CAAAGACGTT CGCTTCCTTG ACGTTTAG
|
Protein sequence | MAAQKKNAPA EYGADSIKVL EGLEAVRKRP GMYIGSTGER GLHHLVWEVV DNAVDEAMAG FATKVEVRIL ENGGVQVTDD GRGIPVAMHS TGIPTVDVVM TVLHAGGKFE EGAYQVSGGL HGVGVSVVNA LSTRLEADIR TDGYEWFQTY DRSVPGTLKQ GEKTKKTGTT IRFWADPDIF ETTSYDFETI ARRLQEMAFL NKGLTIELTD ERVTAEEVVD DVVSDHAEAP KSAEEKSAEA AKPQKVKHRV FHYPGGLVDF VKHINRTKTP IQPSVIDFDG KGEGHEVEIA MQWNAGYSES VHTFANTINT HEGGTHEEGF RTALTSVVNK YAKDKKLLKD KDPNLTGDDI REGLAAVISV KVSQPQFEGQ TKTKLGNTEV KSFVQKICNE QLSHWFEANP AEAKTVVNKA VSSAQARLAA RKARELVRRK SATDIGGLPG KLADCRSTDP SKSELYVVEG DSAGGSAKSG RDSMFQAILP LRGKIINVEK ARIDRVLKNT EVQAIITALG TGIHDEFDIS KLRYHKIVLM ADADVDGQHI STLLLTLLFR FMKPLIENGH VFLAQPPLYK LKWQRSTPEF AYSDRERDGL LEAGRAAGKR INADDGIQRY KGLGEMDAKE LWETTMDPSV RVLRQITLDD AAAADELFSI LMGEDVEARR SFITRNAKDV RFLDV
|
| |