Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mkms_0012 |
Symbol | recF |
ID | 4615576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. KMS |
Kingdom | Bacteria |
Replicon accession | NC_008705 |
Strand | + |
Start bp | 10156 |
End bp | 11298 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639789686 |
Product | recombination protein F |
Protein accession | YP_936021 |
Protein GI | 119866069 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.121144 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTCGTCC GGCATCTGAC GCTGACCGAC TTCCGGTCCT GGGCGCGCGC CGATCTGGAG TTGGAGCCCG GCCGTACCGT CTTCGTCGGC CCCAACGGTT TCGGCAAGAC GAATCTCGTT GAGGCGCTGT GGTATTCGGC AACGCTCGGC TCACACCGAG TGGCCTCGGA CGCACCGCTC ATCCGGGTCG GCGCACCGCG CGCGGTGGTG TCGACCATCG TGGTGAACGA AGGTCGCGAG TTGGCGGTCG ACCTCGAGAT CACCACCGGC CGGGCGAACA AGGCGCGGCT CAACCGTTCA CCGGTGCGCA GCCCCCGGGA AGTGCTCGGG GTGCTGCGTG CGGTGCTGTT CGCCCCCGAG GATCTGGCGC TGGTGCGCGG CGACCCGGGC GAACGCCGCC GCTATCTCGA CGAACTCGCC ACCACCCGTC GCCCGAGCAT CGCCGGCGTA CGCGCCGACT ACGACCGGGT CATCCGGCAG CGCACCGCAC TGCTGAAGAG CGCCGCGGGG GCCCGGTACC GGGGAGACCG CAGCGTTCTC GAGACCCTCG ACGTGTGGGA TGGGCACCTC GCCGCGCACG GTGCGTTGTT GATGGCCGCG CGCGCCGACC TCGTGCACCA CTTGGCGCCG GAGGTCGAGA AGGCCTATCA ACTCCTGGCG CCGGGGTCGC GGCCGGCGGC CATCCGGTAC CGCACCAGCA TCGATGCCGA AGACGATGTC AGCGCCGAGT ACTACGAGGC CGCCCTGCTC GACGCGATGA CCCGCCGGCG CGACGCCGAA CTCGAACGCG GGGTCTGCCT GGTCGGCCCG CACCGGGACG ACCTGGAGTT GCGGCTCGGT GACCAGATGG CGAAAGGCTA TGCCAGCCAT GGGGAGTCGT GGTCGATGGC GTTGTCGCTG CGGTTGGCCG CCTATGAGCT GTTGCGAACC GACGGCAGCG ATCCGGTCCT CCTGCTCGAT GACGTGTTCG CCGAACTGGA CGCCGCCCGG CGGCGCGCCC TGGCCGAGGT CGCAGCGTCC GCGGAGCAGG TGCTGGTCAC CGCGGCGGTC GCCGAGGACA TCCCCGCCGA CTGGGATGCG CGGCGGATCA TGATCCGGAT GCAGGACGAC GACGATGGGC GCGTATCGAT GGTGGAGTCA TGA
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Protein sequence | MFVRHLTLTD FRSWARADLE LEPGRTVFVG PNGFGKTNLV EALWYSATLG SHRVASDAPL IRVGAPRAVV STIVVNEGRE LAVDLEITTG RANKARLNRS PVRSPREVLG VLRAVLFAPE DLALVRGDPG ERRRYLDELA TTRRPSIAGV RADYDRVIRQ RTALLKSAAG ARYRGDRSVL ETLDVWDGHL AAHGALLMAA RADLVHHLAP EVEKAYQLLA PGSRPAAIRY RTSIDAEDDV SAEYYEAALL DAMTRRRDAE LERGVCLVGP HRDDLELRLG DQMAKGYASH GESWSMALSL RLAAYELLRT DGSDPVLLLD DVFAELDAAR RRALAEVAAS AEQVLVTAAV AEDIPADWDA RRIMIRMQDD DDGRVSMVES
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