| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_0005 |
|---|
| Symbol | |
|---|
| ID | 4615569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | - |
|---|
| Start bp | 3441 |
|---|
| End bp | 4544 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639789679 |
|---|
| Product | putative inner membrane protein translocase component YidC |
|---|
| Protein accession | YP_936014 |
|---|
| Protein GI | 119866062 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0706] Preprotein translocase subunit YidC |
|---|
| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.118578 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0820348 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTTAACT GGTTCAGCCT CGACATCATC TATTACCCGG TGTCGGCGAT CATGTGGGTC
TGGTACAAGG CGTTCGCCTT CCTCCTCGGC CCGGACAACT TCTTCGCCTG GGCGCTGTCG
GTGATGTTCC TGGTGTTCAC GCTGCGCGCG ATCCTCTACA AGCCGTTCGT CCGGCAGATC
CGCACCACGC GGCAGATGCA GGAACTGCAG CCCCAGATCA AGGCGCTGCA GAAGAAGTAC
GGCAAGGACC GCCAGCGGAT GGCGCTGGAG ATGCAGAAGC TGCAGAAGGA ACACGGGTTC
AACCCGATCC TCGGATGCCT GCCGATGCTG GCCCAGATCC CGGTGTTCCT GGGTCTCTAC
CACGTGCTGA TGTCCTTCAA CCGGACCCAG ACCGGCATCG GCCGGCTGGG TCTGTCGGTG
GAGGAGAACC GCAGCCTCCC GAACTATCTG TTCAGCGCGA CCGACGTGGG CCACTTCCTC
GACGCCAACC TGTTCGGGGC GCCGCTGGGC GCGACGATGA TCCAGCAGCA CGGCCTGGAG
GCGTTCACCG AATTCAACCG CGTCGCGGTG GTGGTCGTCG GGGTCCCGAT CATGCTGCTG
GCGGGTATCG CGACGCACTT CAACAGCCGG GCCTCGGTGG CCCGCCAGAC GCCGGAAGCG
GCTGCCAACC CGCAGACCGC GTTGATGAAC AAGCTTGCGC TGTACGTGTT CCCGCTAGGT
GTGGTGGTCG GCGGTCCGTT CCTGCCGCTC GCGGTGATCA TGTACTGGCT CGCCAACAAC
ATCTGGACCT ACGGTCAGCA GCACTACGTG TTCGGCAAGA TCGAGAAGGA AGAAGAGGCC
AAGAAGGTCG AGGCGTTGGA GCGCCGCGCC GCGAACGCCC CGGCGCCCGG CGCCAAGCCC
AAGCGCACCC GTAAGGCTCA GGAGGCGGCC GACGCCGGCG CGGATGCGGT CGACGGTTCG
GTGACCGATG CCGCCGGAGC CGACGAGGCG GCCGGTGGGC CCGCGGCGAA GGCGAGCGGG
AACGGGGCGG CCAAACCGAG TGGCGGACAG GCCGTGAGCC GAACGCCCAA GCCGGGAGCC
CGGCCCAAGA AACGCAAGCG TTGA
|
|---|
| Protein sequence | MFNWFSLDII YYPVSAIMWV WYKAFAFLLG PDNFFAWALS VMFLVFTLRA ILYKPFVRQI
RTTRQMQELQ PQIKALQKKY GKDRQRMALE MQKLQKEHGF NPILGCLPML AQIPVFLGLY
HVLMSFNRTQ TGIGRLGLSV EENRSLPNYL FSATDVGHFL DANLFGAPLG ATMIQQHGLE
AFTEFNRVAV VVVGVPIMLL AGIATHFNSR ASVARQTPEA AANPQTALMN KLALYVFPLG
VVVGGPFLPL AVIMYWLANN IWTYGQQHYV FGKIEKEEEA KKVEALERRA ANAPAPGAKP
KRTRKAQEAA DAGADAVDGS VTDAAGADEA AGGPAAKASG NGAAKPSGGQ AVSRTPKPGA
RPKKRKR
|
|---|
| |