Gene Mkms_5980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_5980 
Symbol 
ID4610688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008704 
Strand
Start bp182432 
End bp183526 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content65% 
IMG OID639789634 
Productphage integrase family protein 
Protein accessionYP_935969 
Protein GI119855366 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones81 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.409193 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTTCGC CAATCTCGTC GGGTGAGTCG TGGACCGTTC TCGGTGACGA CGACGCACCG 
GTGGCGCCGA TCGAGCGGTA TCTGAGGTAT CTGACCGACA TCGAGCGGTC CCCGAATACG
ATCAAGGCCT ATGCGCACGA TTTGAAGGAC TGGTTCACGT TTCTGGCAGG CCGCGGTCCG
GACTGGACGG CGGTACAGCT GGAGGACGTC GGCGCGTTCG TGTCGTGGCT GCGGTTGCCG
ATGGCGTTGC GGCAGAGCGG GATTGTGATG CTACCCACGA TGGAACATCA CTGCGGCGAA
GCGACGGTGA ACCGGAAGTT GTCGGCGCTG GCGGCGTTCT ACACCTACGC TGCACGCGAT
GGCGTCGCGG TCGGTGAGCT GTTGACGACC TGGCAGGTCG GTGGGTCGCG CGGCGGATGG
AAGCCGTTCC TGCACCATGT CAGTAACCGG ATGCCACGTT CTCGGCGGAT GGTGACGTTG
AAGACGGCGA AGAAGCTGCC GCGAATACTC ACTCCGGTCG AGGCGCAGGC GGTTCTGGAC
TCCTGCGATC GGCTGCGGGA CCGGTTCCTG CTGGCGGTCC TCTACGACAC CGGTATGCGG
GTCGGCGAGG CACTGGGGTT GCGGCACAGC GACATCGCGG CCGCTGAGTG CGAGATCACT
ATTCGTCGCC GTGACAATGA CAACGGCGCT CGCGCCAAAT CGGTCTCCTC GCGCACGGTG
CCGGTGAGCC CGGAGTTGAT CCGACTGTAT GCCGATTACC TACACGACGA ATACGGGGAT
CTGGATAGCG ATTACGTGTT CGTGAATCTG TGGGGCCGCC CGCACGGGCA TCCATGGACC
TATGCGGCGG TCTACGATCT CGTCCGTCGC TTGCGGCGGC GAACGGGCAT CGACTTCGAC
CCACACTGGC TGCGCCACAC GGCGGCGACG CGGATGCTGC GCGACGGGAT CGGCCTCGAG
GTCGTCGCCA AGCTGCTCGG CCACGCCAAC GTCACCACCA CCGCCGCGAC CTACGGGCAT
CTGACCGTCG AGGACGCCCG AAAGGTGTTA CAGCAGGCCG GCTGGTTCGA CGGGTCAGGG
CAGGTGCACC TGTGA
 
Protein sequence
MVSPISSGES WTVLGDDDAP VAPIERYLRY LTDIERSPNT IKAYAHDLKD WFTFLAGRGP 
DWTAVQLEDV GAFVSWLRLP MALRQSGIVM LPTMEHHCGE ATVNRKLSAL AAFYTYAARD
GVAVGELLTT WQVGGSRGGW KPFLHHVSNR MPRSRRMVTL KTAKKLPRIL TPVEAQAVLD
SCDRLRDRFL LAVLYDTGMR VGEALGLRHS DIAAAECEIT IRRRDNDNGA RAKSVSSRTV
PVSPELIRLY ADYLHDEYGD LDSDYVFVNL WGRPHGHPWT YAAVYDLVRR LRRRTGIDFD
PHWLRHTAAT RMLRDGIGLE VVAKLLGHAN VTTTAATYGH LTVEDARKVL QQAGWFDGSG
QVHL