Gene Mkms_5540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_5540 
Symbol 
ID4610276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008703 
Strand
Start bp48334 
End bp48933 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content63% 
IMG OID639789205 
ProductTetR family transcriptional regulator 
Protein accessionYP_935540 
Protein GI119854935 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00941347 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGGCAG CGGCGCCCAC ACGCGAACGA TTGGTCACCG AGGCGATGCG GCTTTTCAGT 
GCGAAAGGCT TCGAGGCAAC CAGCGTTTCG CAGATCGAAG CCGCAGCTGG GCTAGCCGCC
GGCTCTGGCG CGTTGTATCA CCACTTCAAG TCCAAAGAAG CCTTGCTCAA TGCTGGCATC
GATCGTCAAC TCGATCGCCG CCGCGCCATG CACGACATCC GCGCCCTCTT CGCCGGGCTG
GGAGACCTCC GCGCCGAACT CACGGCGTTG GGCCGGTACC TGCTCACCGT CATCGACGAA
GAAACGGAGC TGCTACAGAT AGCCGCCCGT ACGCCAGCCG GTCGCTCACC TCGGCTCGAC
ACCGCCTACG CGGCACTCGT TGATGGACTC AATGCTGAAC TCACCGAGTG GATCGCGGCC
TGGGCGCCAA CCATCCCATC GCAGGATCGT CGCGTTCTGG CTACCCTCGG AGTCAACGCC
ATCCTCGGCG CACGCTTTGC CACCAGCCTA TTCCGGGAAT CTCCCGGCCA GCTAGCCGAC
GAGAAATACT TAAGCGAGTG GACAGCGGTC CTCGCCGCTC GCATTCAAAC CGTTTGCTGA
 
Protein sequence
MSAAAPTRER LVTEAMRLFS AKGFEATSVS QIEAAAGLAA GSGALYHHFK SKEALLNAGI 
DRQLDRRRAM HDIRALFAGL GDLRAELTAL GRYLLTVIDE ETELLQIAAR TPAGRSPRLD
TAYAALVDGL NAELTEWIAA WAPTIPSQDR RVLATLGVNA ILGARFATSL FRESPGQLAD
EKYLSEWTAV LAARIQTVC