| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_5536 |
|---|
| Symbol | |
|---|
| ID | 4610341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008703 |
|---|
| Strand | - |
|---|
| Start bp | 42157 |
|---|
| End bp | 43797 |
|---|
| Gene Length | 1641 bp |
|---|
| Protein Length | 546 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639789201 |
|---|
| Product | nuclease |
|---|
| Protein accession | YP_935536 |
|---|
| Protein GI | 119854931 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1475] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.021516 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0000306668 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGA ACACCACCAC CGTCACCGAC AACGACACCA ACGCACAGGT CGCGGCGGTA
GGCACCCTCG AACACCTCGA CCCGCACACG TTGGAGCTGG AAACCAACGT CCGCGACGAC
GCCGCACTCG ACGCTGATTT CGTCGCCAGC ATCAAAGAGC ACGGCGTGCT CAACCCCATC
GCAGCGGTGC GCGGACACGA CGGCGTGGTG CGGGTGCGCG CCGGACAGCG ACGCACCCTC
GCCGCACGCG AGGCTGGTCT GACCAGCGTC CCGGTCTACG TGCGCCCAGC CGGTGCGACC
GACGACAAGG CCCAGGTGGT CGAACGGGTC TCCGAGCAGA TCGTGGAGAA CGACCGACGC
CGCGAACTCA CCGAGGCCCA GCGGGCACGC GGCATCCAGC AGATGCTCGA CGCCGGAGCC
TCCGTGACCA AGGTCGCCAA AAAGCTGTCC ATCGGGCGCG ACACGGTCAA ATCCGTGGCC
ACCGCCGCCG GATCACAGGC CGCGATGGAG GCACTCGACG CGGGGCAACT GTCGCTGTCA
GAGGCCGCAG TGCTCAGCGA GTTCGATGAC GACCCCGACG CCATCATGCG TCTGCTCGAA
GTGGCCGGAA CCAACCGATT CGAGCATCGG GTCGCCGAAA TCCGCCAGGA CCGCGCCGCC
CAACAGGCCT ACCAGGAAGC TGCCGCCAGC TACACCGAGC AGGGATACAC CGTGGTCGAG
GACTTCCCCG CCTACGGGGA CACGACCTGC GTGGAACTGC GCTACCTGCG CACCCCCGAG
GGCGAGGCTG CCACCGACGA GCATGTCACC GACCCTGCAC ACTGGGCGGT CTGCCTGACC
GAAGTCGAAG GCTACGTCGA CACCGAGACC GGCGAACCCG TCGACGCCCA CGACATCGAC
TGGCACGCCC GATTCAGCGC CACGGTCGCC GAGGGCAAGC ACGACCCCAG CTCGGTCACC
GAAGTGGTTG TGTGGGAGGC CGATTGGCTG TGCACCGACT ACGCCGCCGC CGGACTGGTC
TTGTGTGACT CACTGGCTAA GCGCGTGGAA GCCCTCGCCC GCGAGGACAG CGACCACCAC
GCCGATGACT CCAGCGACCA GGACGCCGAA GCGCGGGAGG CCGCAGCAGC CGAAGCGGCG
CGGCGCGAGC GGCGCAAGGT CATCGCACTC AACAAGCTCG GCGAAGCCGC CCAGCAGGTG
CGTCGCCAGT TCATCACCGA CAAGATCCTC GCCCGCAAGA CCGCCCCCAA GGGTGCGGCG
ATGTTCGTGG CGAGCTGCCT CACCCGCGAC GTGCGCCTGA TCGAGGAACA CCACGGCGGG
CAGATCAGCG CCGAGCTGCT CGGGGCCAGC GACTCGACAG CAGTGACGAA GATGGTGGCC
GAGCTGCCCG CCACCGGCGA CGGACGCGCT CAGGTGATCA CCCTGGCGCT GGTGCTCGGT
GCACTGGAAG CCCGTACCGG CAAGGACGCC TGGCGAGGCA GCGGCTGGGG CCACTACGTC
GGAGCCGCCG AGCTGCTGCG CTTCCTGGCC GACAACGGCT ACCCGCTGGC CGACATTGAG
CGCGTCATCC TCGGCGAGCA AACCGCCGAT GCACTCTATG ACTCGCTGAC CGAGCAGTCC
GAGCCCGCCG AGGACGACTA G
|
|---|
| Protein sequence | MSENTTTVTD NDTNAQVAAV GTLEHLDPHT LELETNVRDD AALDADFVAS IKEHGVLNPI
AAVRGHDGVV RVRAGQRRTL AAREAGLTSV PVYVRPAGAT DDKAQVVERV SEQIVENDRR
RELTEAQRAR GIQQMLDAGA SVTKVAKKLS IGRDTVKSVA TAAGSQAAME ALDAGQLSLS
EAAVLSEFDD DPDAIMRLLE VAGTNRFEHR VAEIRQDRAA QQAYQEAAAS YTEQGYTVVE
DFPAYGDTTC VELRYLRTPE GEAATDEHVT DPAHWAVCLT EVEGYVDTET GEPVDAHDID
WHARFSATVA EGKHDPSSVT EVVVWEADWL CTDYAAAGLV LCDSLAKRVE ALAREDSDHH
ADDSSDQDAE AREAAAAEAA RRERRKVIAL NKLGEAAQQV RRQFITDKIL ARKTAPKGAA
MFVASCLTRD VRLIEEHHGG QISAELLGAS DSTAVTKMVA ELPATGDGRA QVITLALVLG
ALEARTGKDA WRGSGWGHYV GAAELLRFLA DNGYPLADIE RVILGEQTAD ALYDSLTEQS
EPAEDD
|
|---|
| |