| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_2010 |
|---|
| Symbol | |
|---|
| ID | 4616862 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | - |
|---|
| Start bp | 1822233 |
|---|
| End bp | 1822868 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639785101 |
|---|
| Product | superoxide dismutase |
|---|
| Protein accession | YP_931500 |
|---|
| Protein GI | 119873493 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0605] Superoxide dismutase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00876227 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 71 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCGG TTAAGAAATA CACGCTTCCG AACCTGCCCT ATGCCTACAA CGCCCTGGAG
CCGTACATCG CCGAGGAGAT AATGAGGCTC CACCACCAGA AGCACCACCA GGGCTATGTC
AACGGCGCAA ACGCCGCCCT CGAGAAGCTG GAGAAGTTTA GGAGGGGCGA GGCCCAGATT
GACATAAGGG CGGTGCTCAG AGACCTCTCC TTCAACCTCA ACGGCCACAT ACTACACTCC
ATCTTCTGGC CCAACATGGC GCCCCCCGGC AAGGGCGGCG GCAAGCCCGG CGGGAGGACT
GCCGACTTGA TAAACAAGTT CTTCGGCAGT TTTGAGAAGT TCAAGGAGGA GTTCAGCCTC
GCCGCCAAAA ACGTGGAGGG CGTAGGCTGG GCCATCCTAG TATACGAGCC GCTGGAGGAG
CAGCTCCTGG TGTTGCAGGT GGAGAAGCAC AACCTTATGC ACGCGGCAGG CGCCCAGGTT
CTCCTGGCGC TAGACGTCTG GGAGCACGCC TACTACCTCC AGTACAAGAA CGACCGCGGT
AGCTACGTAG ACAACTGGTG GAATGTGGTA AATTGGGACG ACGTAGAGCG GCGTCTTGAG
AAGGCTTTAA ACGGCCAGAT CGCCCTCAAG ATTTAA
|
|---|
| Protein sequence | MASVKKYTLP NLPYAYNALE PYIAEEIMRL HHQKHHQGYV NGANAALEKL EKFRRGEAQI
DIRAVLRDLS FNLNGHILHS IFWPNMAPPG KGGGKPGGRT ADLINKFFGS FEKFKEEFSL
AAKNVEGVGW AILVYEPLEE QLLVLQVEKH NLMHAAGAQV LLALDVWEHA YYLQYKNDRG
SYVDNWWNVV NWDDVERRLE KALNGQIALK I
|
|---|
| |