Gene Pisl_2004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_2004 
Symbol 
ID4617671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1819680 
End bp1820102 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content53% 
IMG OID639785095 
Producthypothetical protein 
Protein accessionYP_931494 
Protein GI119873487 
COG category[S] Function unknown 
COG ID[COG2835] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.462402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTATA GACTTATGGA CGTCTTGGCT TGCCCCTACG ACAAGACTTT TCCACTCCGC 
CTAATAGTCA TAAAGCGGAC GGAGCACCCA GAGAGGCAGT ACACCTGGCC CCGCAAGCCC
TTCTGCGAGG AGTACTGCTC CTACCGCGAC CTAAAGATAA AGGAGCACCC CAAGCCAGAC
GCCCTCCCCT GTGAAGAGTG CCACAAGTGG GAGATAGAGA CCGGAGTCAT CTACTGCCCA
ACCTGCGGCA GGTGGTACCC AATAATCGAG GAGATACCCA GGATGCTCCC AGACGAGCTG
AGAAACGAAA AGGAGGAACT CGCCTTCCTA CAGAACATAG CCGAAGACCT AAAGAAATTA
GCCCCAGATC TAGCAGACAA GATCTTATAC CAAGGCAAGC CCTTCGCGCT AAAAAAGCCT
TAA
 
Protein sequence
MKYRLMDVLA CPYDKTFPLR LIVIKRTEHP ERQYTWPRKP FCEEYCSYRD LKIKEHPKPD 
ALPCEECHKW EIETGVIYCP TCGRWYPIIE EIPRMLPDEL RNEKEELAFL QNIAEDLKKL
APDLADKILY QGKPFALKKP