Gene Pisl_2003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_2003 
Symbol 
ID4617483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1818703 
End bp1819638 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content54% 
IMG OID639785094 
Producthypothetical protein 
Protein accessionYP_931493 
Protein GI119873486 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0343] Queuine/archaeosine tRNA-ribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAGTAG TCTTAGGAAG CCCCCTCTCT GCAGTGCCAA AGCCCTGGCT TTACTTCGAC 
GTGCCAGGCG TAATGATAAA TGCAATTGAA ATAAAACGCG ACCCCCGGCG GGTGCTTGGA
TACGAGGGAG AGCTCTGGGT AGACTCAGGC GGTTACCAGA TATTAAAGAG GGGGCTTTTG
CTAGACGTAG ACAAGATCGC AGAGATATAC CGCCGGGTCG ACGCCCAGCT ATACCTCTCT
CTAGACATCC CGCCGTCTCC AGAAGACCCC CCAGACCTCG CCGAGAAAAA AATGCGGAAG
TCGTATCAAA ACTGGCTAAA GCTTAGAAAG TCTGTGGGAG ACGCCGTAGT GCCGGTGTTA
CATGTCTATA GAGACCCGGC GCTCTTTGAG AAATACCTCT CTCTCTACCG AGACGCGCCA
GCCCTCGCCA TAGGCGCCGC CGTGCCCTAC GTCTTAATTA CAAGAGGCGT TCCCAGGGGG
TCTAGAGAAT ACGCCCTCCG CTTGATTAAG AGAGCTAGAG AGGAGTACCG GGGGCCCCTC
CACGTCTTAG GCATGGGGAG CCCCTCTGTA ACTCCCATAC TCGCCCTACT TGGCGTAGAT
AGTACAGACA GCGCCACCTG GCGTCTCAAG GCGGCCTATG GCAAAGTGCT TCTGCCGGGG
GGCGGCGAGC GCCACGTCAC AGACAGAGTT GTAAACTTCG GCAGAGCCAA ACCAAAAGAC
GGAGAGCTTG AGGAACTCAG GAGATTTCTA GCAGAAAACG GCTTCCCAGC TCTAGACGGC
TTCTACGAGA GGATAAAGAC AAGTTTTGAA TACCGCGCCC TCGTCAACGC CTTTGTTGTC
ATAAAATCGA CGTCACATCC GCCGAGGTCA ACAGCATTTA GAAAACTATA TGTAAAAATA
GCAGAAGAGG TCTCTAAAGC CGCCTCGCGG CAGTAA
 
Protein sequence
MRVVLGSPLS AVPKPWLYFD VPGVMINAIE IKRDPRRVLG YEGELWVDSG GYQILKRGLL 
LDVDKIAEIY RRVDAQLYLS LDIPPSPEDP PDLAEKKMRK SYQNWLKLRK SVGDAVVPVL
HVYRDPALFE KYLSLYRDAP ALAIGAAVPY VLITRGVPRG SREYALRLIK RAREEYRGPL
HVLGMGSPSV TPILALLGVD STDSATWRLK AAYGKVLLPG GGERHVTDRV VNFGRAKPKD
GELEELRRFL AENGFPALDG FYERIKTSFE YRALVNAFVV IKSTSHPPRS TAFRKLYVKI
AEEVSKAASR Q