Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_2003 |
Symbol | |
ID | 4617483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 1818703 |
End bp | 1819638 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639785094 |
Product | hypothetical protein |
Protein accession | YP_931493 |
Protein GI | 119873486 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGAGTAG TCTTAGGAAG CCCCCTCTCT GCAGTGCCAA AGCCCTGGCT TTACTTCGAC GTGCCAGGCG TAATGATAAA TGCAATTGAA ATAAAACGCG ACCCCCGGCG GGTGCTTGGA TACGAGGGAG AGCTCTGGGT AGACTCAGGC GGTTACCAGA TATTAAAGAG GGGGCTTTTG CTAGACGTAG ACAAGATCGC AGAGATATAC CGCCGGGTCG ACGCCCAGCT ATACCTCTCT CTAGACATCC CGCCGTCTCC AGAAGACCCC CCAGACCTCG CCGAGAAAAA AATGCGGAAG TCGTATCAAA ACTGGCTAAA GCTTAGAAAG TCTGTGGGAG ACGCCGTAGT GCCGGTGTTA CATGTCTATA GAGACCCGGC GCTCTTTGAG AAATACCTCT CTCTCTACCG AGACGCGCCA GCCCTCGCCA TAGGCGCCGC CGTGCCCTAC GTCTTAATTA CAAGAGGCGT TCCCAGGGGG TCTAGAGAAT ACGCCCTCCG CTTGATTAAG AGAGCTAGAG AGGAGTACCG GGGGCCCCTC CACGTCTTAG GCATGGGGAG CCCCTCTGTA ACTCCCATAC TCGCCCTACT TGGCGTAGAT AGTACAGACA GCGCCACCTG GCGTCTCAAG GCGGCCTATG GCAAAGTGCT TCTGCCGGGG GGCGGCGAGC GCCACGTCAC AGACAGAGTT GTAAACTTCG GCAGAGCCAA ACCAAAAGAC GGAGAGCTTG AGGAACTCAG GAGATTTCTA GCAGAAAACG GCTTCCCAGC TCTAGACGGC TTCTACGAGA GGATAAAGAC AAGTTTTGAA TACCGCGCCC TCGTCAACGC CTTTGTTGTC ATAAAATCGA CGTCACATCC GCCGAGGTCA ACAGCATTTA GAAAACTATA TGTAAAAATA GCAGAAGAGG TCTCTAAAGC CGCCTCGCGG CAGTAA
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Protein sequence | MRVVLGSPLS AVPKPWLYFD VPGVMINAIE IKRDPRRVLG YEGELWVDSG GYQILKRGLL LDVDKIAEIY RRVDAQLYLS LDIPPSPEDP PDLAEKKMRK SYQNWLKLRK SVGDAVVPVL HVYRDPALFE KYLSLYRDAP ALAIGAAVPY VLITRGVPRG SREYALRLIK RAREEYRGPL HVLGMGSPSV TPILALLGVD STDSATWRLK AAYGKVLLPG GGERHVTDRV VNFGRAKPKD GELEELRRFL AENGFPALDG FYERIKTSFE YRALVNAFVV IKSTSHPPRS TAFRKLYVKI AEEVSKAASR Q
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