Gene Pisl_1995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1995 
Symbol 
ID4617803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1812552 
End bp1813388 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content48% 
IMG OID639785086 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_931485 
Protein GI119873478 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00027659 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGTCGA TAAAGTTTCC CAAACCAGAC GAGGGCTTTG CTGTTTTAGT AGATTTAGAC 
AGATGTATTG GATGTAGAGC TTGCCAAGTG GCATGTAAAG AGTGGAATGG ATTACCTGCG
GAACGTACAA CATTTACAGG TAGCTTAACT TCGCCACAAT CGCTAACAGC AAAAAGTTGG
AAGGTTGTAT TTTACTATGA GGGTGTAACT AAAAAGTATC TGTTAACACC AGCTGGAGAA
GTCGCTTTTA GTCAGATAGA AATTTCATCA CTTCCATTCA ACTGTATGCA TTGTGTTGAG
GCGCCATGTG CAAGAGCTTG TCCTGTTGGC GCGATAAAAG TTACCCCCGA GGGCGCCGTT
GTAATAAATA GAGACGAGTG TGTTGGCTGT GGCTACTGCC AGATGGCATG TCCCTATGAC
GTGCCGAAGA GGGGAGACGA CGGAAAGTTC TACAAGTGCA CCTTCTGTGT AGACAGAATA
CAAAACGGTA AGGAGCCTGC ATGTGTCGAA GTATGTCCAA ATAGAGTGTT TACCTTCGGG
CCGGCGAGGG ACATAATTGA AAAGGCTAGG CAGGAGGAGG CTAAAGGCAG AAAGGTATAT
GGCCTCAACG TGGATAAATA CGTCGGCGGC TCTGTCAGGT GGATATATGT GACCTCTGAG
AGGAGGAGCT TTGCCATAGA CAGACACTTT GCCGACAAGG GCAAGCCCGT GGCTGTGCAG
GAAGTCAGAG AAGTTTTGAA GCCGCTTGTC ACCATAGGAG GCGCTGCGCT TGCTGGCGTT
CTTGCTGTTT TGGGTTTTGT TGCTTGGCGT CGGGCGAGGG TAGAAGAGAA AAAATAA
 
Protein sequence
MVSIKFPKPD EGFAVLVDLD RCIGCRACQV ACKEWNGLPA ERTTFTGSLT SPQSLTAKSW 
KVVFYYEGVT KKYLLTPAGE VAFSQIEISS LPFNCMHCVE APCARACPVG AIKVTPEGAV
VINRDECVGC GYCQMACPYD VPKRGDDGKF YKCTFCVDRI QNGKEPACVE VCPNRVFTFG
PARDIIEKAR QEEAKGRKVY GLNVDKYVGG SVRWIYVTSE RRSFAIDRHF ADKGKPVAVQ
EVREVLKPLV TIGGAALAGV LAVLGFVAWR RARVEEKK