| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1994 |
|---|
| Symbol | |
|---|
| ID | 4616360 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | + |
|---|
| Start bp | 1809043 |
|---|
| End bp | 1812549 |
|---|
| Gene Length | 3507 bp |
|---|
| Protein Length | 1168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 639785085 |
|---|
| Product | molybdopterin oxidoreductase |
|---|
| Protein accession | YP_931484 |
|---|
| Protein GI | 119873477 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00248434 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 0.623022 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTGG CGACGACTAG GAGAGGTCTA CTGAAGATAG CCGCAATCGC AGGTAGTGCC
TTCGCGCTTC CAGCGTCGGC GCAAGTGCCG TTTAAAGAGT GGAAGACTCA GTGGACTCTC
GGCGAAATAG GCAGGAAGAC TGACATAATA AAAGCCTCTG TAGTCCCAGT CGTCTGCCCC
TATTGTTCCA TAGGATGTTC TATAGACATG TACGTAGTGG GTGACAAGAT AGTCCACACC
ACGGGGTCTC AAGATTCTTT CATAAACAAA GGGGCTCTCT GTCCTAAGGG CAAGGCGGCG
TTTCAAGTTG TTGATAATGA GCTTAGGCTG AAAAAGCCGA TGATTAGAAC AGGCCCCAAG
CCTCCACCTG AGGAGCTACT TAGGGCTAAG AGTTGGGATG AACTTGTGGC TATCGCTAAG
AAATATCCGC CCAATTGGAG AGAGGTAAGT TGGACTGAGG CGCTACAATA CATTGCGGAG
AGACTAGGTG AAATTCTAAG CCGCTGGAGA CAAAACACAG GGGCTCCGGC GCAAAAAGAC
GGATATTACT ACGTGGGTAA AGATGTGCCT GTACAAGTAA TTGGCTCGTC TATTCTTGTA
AATGAAGAGT CATATCTAAT TAGAAAGCTT GCGGCATTTA TTGGTACGTC TAACATGGAC
GCCCAATACC GTAAATGTCA CTCAAGTACA GTGGCAGCAC TTGCTGTAAC ATATGGATGG
GGGGCAGAAA CGGCCACGCT AGAGGATCTC GCCCTAGCAG ATATAGTGCT TTTCTTCTCA
AGTCCCGCCG AGGCTCATCC AGTGTCTCTT GCACACTTTC TCAAGGGTAA AAGAGAGAGG
GGTACTATAT TTATCACTTT TGACCCAAGA TATTCCAGAA CAGCCGCCAT TTCTGATATA
TGGGTTCCCT TCCGTTCTGG TACAGAAACA GCTATACTAC ACTATATACT ACATTACGCC
TTCTTTGAGA GAAACCCGCC CATAGATCAA CTCCCTGAGT TTCGCAGACT TATGAGCCGC
TGGAATATCA CAGATGACGA CTTGGCGGAC TTAAAGGAAT TGCTTAAAGA TTATACAGCC
GATGAAGTAT CAAAAATATC GGGCGTCTCT GTCGACCTCT TAAGGACTGT AGCGCAGATC
TATGTAGAAA ACAGCGGCGT GGTTACAAAC CATAAGAAAC ATGGCGTAAT ACAGTGGGCG
ATGGGTATCA CACAACACAC AAATGCCACT ATAAACATAA TTCGGGCTAT TGCTATTGTC
CAATTGCTGT TGGGCAATGT GGGCTATCCA GGAGGTGGTG CACATCCATT CCGCGGTCAT
AGTAATGTAC AAGGGACTAC CGATATGCAT GGCGGCGGTT GGGACGCCTT ACCTGGCTAC
CACGGCAATC CCACCAGCCC CTTTGAGGTG CGATTGTATC AAGACTGGAA ATTACAGGGT
ATGCCCGATG CGTGGAGTTG GGAAGTTCCA CAGTGGGCTC GTAACAGATT TGCCACAACA
GCACCTGATA GAGGTAAAGC CGACTTAGTA AAGGTATTGC AAGTGTATAA ATTCTACGGC
TGGCGTAGGC TAGAGCTTGC TTGGGGCTTG TTCTGTGGGA CAAAACCAGA GGAAGACCCC
GTCAACGGCG TTGTGATATG CGATTTCCCA TTTGGGGCTG GCTCTTCTGA AATAACATTT
GTGCGGAGGG CGTTAGCCGG CGAAATTAAG GCCGCGTTTA TATTTGGCGA AAATCCGGCA
GTAACTAATC CAAATACTAA ACTTGTTTGG GCTGCGCTAT CTTCTCTAGA ATTACTTGTG
GTTACCGATA TATTTCAGAG TGAAACAGCG TGGTTTGCTG ACGTAGTTCT TCCCGCTGCG
TCATTTGCAG AAAAGGAGGG TACTAGGACA AACACAGGCG GAGTAATTCA GTGGACTTAT
AGAGCTGTGT CTCCAAGAGG AGATTCAAGA CCTGACTATT GGATTGTTGC GAAAATATAT
GAATATCTAC GGCGGTACGG CGTTATTAAA CTACCGAGTG AAGTCGCTGG TGTAAAAACT
GAGAAAGTTA CGTTTAGAAA GGGCGGGAAG CTTGTATTTG TATATGAGAG GTCTCTGAAA
CCAGATGAAA GTTGGAACTA CGCAGGAGGT TTGGGCAGGA GCGCGCCGGT TTCGCCTATA
GAAGCTGAGG TTAACCCAAG GATAATAAAC AAGGAGATAA ACTTCGCGGT ATTGTTATAC
CAAGGGATCT ACGACCCGAT AAGAGACGAG TTTACAACTA TGAGAAAAAG CACAAGACTA
AGAGAGGAGG GCGAGATAGA TGGCGTGTTT AGTAAAAAGT TTATGGTGTA TAAAGACTGG
GGCTGGTGCT GGCCTATGAA CGTGAGGTTC CGCTACAATT ATGATGTTCT AAAGGTGATG
TTGGGGACCG AAGTTAAGGT GAAGGCGGCA GGTAGGGAGT ATGTAGTCAC AGGCGAGACA
GGGGAATGGA TAGATGAATA CACTGGCGAG TATAGGCCAG CATTTCTCCC AGGTCATAAC
TTCTGGGTTC CAAGAAGTTT TAAGCGGAAG TTAAGCGGCG TGGCAGACCT CTTTGGTGGA
CTAGATGTAG TTACATATAT TAGAACAGGG GAGGTAAAGA TAGACGGAAA GTTTGTAGTA
GAGGAGGGCG GCGAAGTAAA GACTTTAAGC TTTGAGGAAT ATGTTGCAAA AACTGGTATG
AAATATCTCT GGGTTAACGA TACGCTCTAC TGGGATGAGG AGACTACGAG TTTTAAAGCT
GCTGTGAAAA GACCCTATTT CTCTGGTGGC GGATGGCGCG CCTTTAAGCC AAAGATGGAA
CAGATGCGGG AACTCCTACG TAAGTATTAT CAAGAGTCTG GCAGTCTTAA AATTGCTGTC
TTAAAAGCTA TAGGCGATAT GGGCGGATGG TATGCGGGTT ATAACTTCCA GTGGCCTATA
CACACCGAGC CTGTAGAGTC GCCTGATATA GAACTAGCTA TAAAATACCC CACGTTGGCA
TGGCTAAATC CATACAATAT ATCTGTACTG AAAGAAGAGC CAGATATTGT AAGGGGCAAA
CCTGTTGGTG TAGCATTAGA GCCAAAAGAT TTAGAGAGTC TGCCAGGAGA ACTTGTAGTA
ATAACAAGCA ATAGGTTGAC CGAGCATTTC CACAGCGGTA CTATGACCAG AAACTCTCCC
ATGTTAGCAG AATTAGTGCC AGAGCCCTTT GTATATGTAC CTAGAGCAAT TGCTCAAAAA
CTAGGGATTG CGTCAGGCGA TTATGTGGAT ATAATAACAG CAAGAGGGTC CATAAGGCTT
AAAGCATATG TAACGGAGGG GATGGCGTAT CTAAATGTAA ATGGTAAGAA AATACCCGTT
GTAAGCGTTG TCTGGACGTT TGGCTTTCTG GGATATATAG GCGGTGCTGT AGCTAATTTT
ATAGTTCCCG ACGTAGGAGA TGTAGTTACT ACAATACAAG AGTCTAAGGC ATGGCTTGGC
AAAATAAAGA AGGCTGAAAT GGTGTAA
|
|---|
| Protein sequence | MTLATTRRGL LKIAAIAGSA FALPASAQVP FKEWKTQWTL GEIGRKTDII KASVVPVVCP
YCSIGCSIDM YVVGDKIVHT TGSQDSFINK GALCPKGKAA FQVVDNELRL KKPMIRTGPK
PPPEELLRAK SWDELVAIAK KYPPNWREVS WTEALQYIAE RLGEILSRWR QNTGAPAQKD
GYYYVGKDVP VQVIGSSILV NEESYLIRKL AAFIGTSNMD AQYRKCHSST VAALAVTYGW
GAETATLEDL ALADIVLFFS SPAEAHPVSL AHFLKGKRER GTIFITFDPR YSRTAAISDI
WVPFRSGTET AILHYILHYA FFERNPPIDQ LPEFRRLMSR WNITDDDLAD LKELLKDYTA
DEVSKISGVS VDLLRTVAQI YVENSGVVTN HKKHGVIQWA MGITQHTNAT INIIRAIAIV
QLLLGNVGYP GGGAHPFRGH SNVQGTTDMH GGGWDALPGY HGNPTSPFEV RLYQDWKLQG
MPDAWSWEVP QWARNRFATT APDRGKADLV KVLQVYKFYG WRRLELAWGL FCGTKPEEDP
VNGVVICDFP FGAGSSEITF VRRALAGEIK AAFIFGENPA VTNPNTKLVW AALSSLELLV
VTDIFQSETA WFADVVLPAA SFAEKEGTRT NTGGVIQWTY RAVSPRGDSR PDYWIVAKIY
EYLRRYGVIK LPSEVAGVKT EKVTFRKGGK LVFVYERSLK PDESWNYAGG LGRSAPVSPI
EAEVNPRIIN KEINFAVLLY QGIYDPIRDE FTTMRKSTRL REEGEIDGVF SKKFMVYKDW
GWCWPMNVRF RYNYDVLKVM LGTEVKVKAA GREYVVTGET GEWIDEYTGE YRPAFLPGHN
FWVPRSFKRK LSGVADLFGG LDVVTYIRTG EVKIDGKFVV EEGGEVKTLS FEEYVAKTGM
KYLWVNDTLY WDEETTSFKA AVKRPYFSGG GWRAFKPKME QMRELLRKYY QESGSLKIAV
LKAIGDMGGW YAGYNFQWPI HTEPVESPDI ELAIKYPTLA WLNPYNISVL KEEPDIVRGK
PVGVALEPKD LESLPGELVV ITSNRLTEHF HSGTMTRNSP MLAELVPEPF VYVPRAIAQK
LGIASGDYVD IITARGSIRL KAYVTEGMAY LNVNGKKIPV VSVVWTFGFL GYIGGAVANF
IVPDVGDVVT TIQESKAWLG KIKKAEMV
|
|---|
| |