Gene Pisl_1983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1983 
Symbol 
ID4617409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1797973 
End bp1798830 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content59% 
IMG OID639785074 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_931473 
Protein GI119873466 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)
[COG2221] Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.517717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.0153359 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCT ACGCTGACTT CGGCAGGTGC GTCAGGAGCT TCTGGACAAG TGCAAGCTGT 
AGAAAATGCG TCGATGCGTG TCCCGCGGGC GCGCTCTACG TCGACGGGAG GTGGGTAAAG
GCCGAGCCAA GCCTCTGTGT TGGCTGTGGC GTCTGCATGT CTGCATGTCC CACCGGCGTC
TTCACAGCCC AGCTGGGGCC ATATATCAGC TGTAGAGAGG GCGGCGTCTG TATAAACGGC
CTAAGGGCGG AGGACTACGT GAAGCTGGTG GAGAAATACG GCGAGATTAC GGTAGACGCC
AGATGCGACG ACTGTAGCCT CAGGGGTAGG GGGCTAGAGG AGCTGGAGAA GGCAATCAAG
GCGGGTCTAA AAATTAGGGT TATCAGAGGC CGCGGCGGCG ACATAGGCAG AAGGATGCTC
CTCCGGAGGG GCCTCGCCAA GCTCGCCGGC GGCGATAATC TACTTGAGGT GAAGAGGGGC
CCGCCCCGGC GTATCTCTTA CGACAGAGAG AAGGCGGTGG AGCTAGGCCT GGTCAACCCC
AGGAGGCCAG TTATCGACAT GGAGAAATGC ACAGCCTGCT TCCTATGCGC CGGCGTGTGT
CCAACTCAAG CCATTGAGGT AGACGAGGAC GAAGTTATGC TAAAAGTAGA TAGCTACAAA
TGCGCGGAGT GCGGCCTCTG CGCCGAGGCT TGTCCAGAAG GCGCGATCAA GCTCGTGGAG
GGGGGAGAGC CCGTGGAGAC CTACCTATTC GAAGTGGAGC AGTGCCCCAA CTGCGGTACG
GTGTATCCCA AGAAGAGGGG CGTGTGTCCT GTGTGTGGAG TTGGGAGAGA ACTGATTAGG
GAAGTGTATG GAGTGTAG
 
Protein sequence
MKIYADFGRC VRSFWTSASC RKCVDACPAG ALYVDGRWVK AEPSLCVGCG VCMSACPTGV 
FTAQLGPYIS CREGGVCING LRAEDYVKLV EKYGEITVDA RCDDCSLRGR GLEELEKAIK
AGLKIRVIRG RGGDIGRRML LRRGLAKLAG GDNLLEVKRG PPRRISYDRE KAVELGLVNP
RRPVIDMEKC TACFLCAGVC PTQAIEVDED EVMLKVDSYK CAECGLCAEA CPEGAIKLVE
GGEPVETYLF EVEQCPNCGT VYPKKRGVCP VCGVGRELIR EVYGV