Gene Pisl_1976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1976 
Symbol 
ID4618067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1792174 
End bp1793193 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content55% 
IMG OID639785067 
Producthypothetical protein 
Protein accessionYP_931466 
Protein GI119873459 
COG category[S] Function unknown 
COG ID[COG5493] Uncharacterized conserved protein containing a coiled-coil domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.00000586901 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGTAGAAG AGGTTAGGAG GGTTTTGCTT GAGCATCCTG AGATTATTGC GGAGGCTCTT 
GAGGCTAGGC CTGAGGTTCT CTACAGGGCA CTTGCCAAGC TTATGCCGTG GCAAAACCTA
GCCACCAAAG AGGACGTGAG ATCGCTGAGA GAGGAGATCC AGAGGATAGA GGAGAAGATG
GCCACCAAAG ATGACCTAAA ACACTTGGCA ACTAAAGACG ACGTCAGTAG GCTTGAGGAG
CGGCTTGAGG AGACGAGGAG AGAGATGGCT ACGAAGGAGG AGGTTAAGGC TCTTGAGGCC
AAAATGGCCA CCAAGGAAGA TCTAAAGGCC TTCGCCACTA AAGAGGATCT AAAGACTCTT
GAGGCTAGAG TGGCGACGAA GGACGATCTA AAAGCTCTCG CCACGAGAGA GGAGCTGAGG
GCTCTCGAGG AGAGGGTGGC CACCAGAGAA GACGTGAGAA GACTTGAGGA GCAACTGGGA
GAGGTGAGAA AAGTCATGGC TACCAGGGAC GATCTCAAGG CCTTTGCCAC AAAGGAGGAC
GTTAGGAGGC TTGGAGAGCA GTTGGAGGAG GTGAGAAAAG TTATGACTAC GAAGGATGAA
CTTGTGGCGT TTGAAAAACG CCTCATGGCG TATGTCAACG CGCTGGGGGC TAGATGGGGG
GTAGTTAGCG AGGATGTATA TAGAGAGGGG GTGAGGGAGC TTCTGCGGGA CGTGGGATAC
ACGGTGGAGC GGTGGGTCTA CTACGACGGA GAGGGCTACG TCTACGGCTA CCCGGCGGAG
GTGGAGCTAG ACGTCGTGGC TAAAGACGGC AAAACAATAG CCGTAGAGCT CACAGCCGCC
CTCAAGAGGG GAGACCTCCA GTACATCAAA AAGAAGGCCG AGCTCTACCA GCGGACAGCC
GGCAGGCCGC TGGACAGAGT GATAGTGGTG ACGCCGTTTA TACACGACAG AAACCCAGAC
CTGGTCAGAG CCAAGGCAAA GGAGTACGGC ATAGACATCG TAGCCCCCGG AGACCTCTAG
 
Protein sequence
MVEEVRRVLL EHPEIIAEAL EARPEVLYRA LAKLMPWQNL ATKEDVRSLR EEIQRIEEKM 
ATKDDLKHLA TKDDVSRLEE RLEETRREMA TKEEVKALEA KMATKEDLKA FATKEDLKTL
EARVATKDDL KALATREELR ALEERVATRE DVRRLEEQLG EVRKVMATRD DLKAFATKED
VRRLGEQLEE VRKVMTTKDE LVAFEKRLMA YVNALGARWG VVSEDVYREG VRELLRDVGY
TVERWVYYDG EGYVYGYPAE VELDVVAKDG KTIAVELTAA LKRGDLQYIK KKAELYQRTA
GRPLDRVIVV TPFIHDRNPD LVRAKAKEYG IDIVAPGDL