Gene Pisl_1962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1962 
Symbol 
ID4616929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1778244 
End bp1779479 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content47% 
IMG OID639785053 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_931452 
Protein GI119873445 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0142218 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00000000000291974 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTTTTT GTGCAAATAC TGCACGCTTC AGACTGTATA AATCCACGCG CCGAATTACG 
CATATGGCAT ACGCCTCCCT AGCCGCGAGA GCTTGTGTTA AATGTAGAAA CTGCGTCGAG
ATTTGCCCCT CATATATCGC CACTAGAGAT ATAAAATATT CGCCAATGGG TAGACTTGAG
CTGTTGAGGA AGGGAGCCTC TGAGGAGGAG AAATTTAAGG TTTTTTCGTT ATGTACTATG
TGTAAGAGAT GTGCCTACTT CTGCCCCCTG GGGCTGGATG TCGCAGAAGT GACTAGACAA
GTTAGAGATT TCCTCGCGGC TAGGGGGATG GCGCAACCAT ATGTGGCTAA AGTCGTTGAG
AATTTCCTCA GGCGAGGTAA TAACATAGGC ATGCCGGCGA AAGTTGTAGC CGCGACGCTC
CGAGTTGTTG TGAAAAAAAT TGAGAGTGAA AAAGGCGAGA CGGCGCGCTT ATATTTATAC
GACGGCGAGA AATTCACCGA TGTTTCAGGC GCCGAGGTTA AGCCCTCCGG TAGATACGCC
TTGCTATTCC CCTCCTCCTC CGACATTTTT GAATTTGAAG ACGCGCTCAA GGGCTATATA
TATCTGCTCA ATAGAGTGGG ATACGACGTT GTTATTAGTC TACGGCTTGC AGACACAGCA
AACTACGGCT ATTACCTAAG CGGGGCGCAT ATGTATAAAA TTGCCAATAT GTATTTAGAG
GAGATTAAAC GCGTTTCACC ACACATTACG ATATTTGGCG AATGCGGCCA CGGCTGGCAT
ATCTTCACTA GACTTGTAGC TCCAAAATCG CCGCGGCCCT CCGCCCATAT CCACCAGATA
CTCCATAGAG CTTTGACACG TGGAGAGTTG AAAATTAGGC GTATAGAGAC TAGAGGGCTT
GTTGTGTATA TGGACCCATG TAACTACAGC AGAGGGGCTG TACCCCTAAT AGAGGAGCCA
AGGGCGTTGT TAAAAGCGGC GGTTGGCCAA TATGTAGAAC TTTGGAAAAA CCCAAGAGAG
TCGTTATGTT GTCTAGGAGG TGGCGGACTC ATAGCGCCAG AGATGTTAAA TACAGCTGTG
GAGTATTGGA AAAGGGCATA TGGCGGCATT GAATTTACAA CTGCCGTAAG GCCCTGCGCG
ACATGTAAAG CACAGCTAAA ACGAGTGTTT AACACAATGG GTATAAAGGC AGAGACGACG
GGGGTCGTCG AATTATTGTA TAAAGCAGCC GACTAA
 
Protein sequence
MAFCANTARF RLYKSTRRIT HMAYASLAAR ACVKCRNCVE ICPSYIATRD IKYSPMGRLE 
LLRKGASEEE KFKVFSLCTM CKRCAYFCPL GLDVAEVTRQ VRDFLAARGM AQPYVAKVVE
NFLRRGNNIG MPAKVVAATL RVVVKKIESE KGETARLYLY DGEKFTDVSG AEVKPSGRYA
LLFPSSSDIF EFEDALKGYI YLLNRVGYDV VISLRLADTA NYGYYLSGAH MYKIANMYLE
EIKRVSPHIT IFGECGHGWH IFTRLVAPKS PRPSAHIHQI LHRALTRGEL KIRRIETRGL
VVYMDPCNYS RGAVPLIEEP RALLKAAVGQ YVELWKNPRE SLCCLGGGGL IAPEMLNTAV
EYWKRAYGGI EFTTAVRPCA TCKAQLKRVF NTMGIKAETT GVVELLYKAA D