Gene Pisl_1961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1961 
Symbol 
ID4617192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1777287 
End bp1777865 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content48% 
IMG OID639785052 
Producthypothetical protein 
Protein accessionYP_931451 
Protein GI119873444 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000657017 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000000306549 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCATGA GAAAAGACCG TGTTAACATA GCTGTTGCTA AAGAAATCGC AGAAGAGCTG 
GCTAAGGTAG CTGAAGAACT CGGCATGACG CAATATGCGT TGGCGAATCA AATCCTCGGC
GTAGGGCTTG AACTTCTACG CCAAGGCTAC AGCCTGGCTC AAATTAAAGA AATTACACTA
TTTTACAAAG TTATGATAGA ACTCGAAAGC GTGCCTGTGC CCGGCAGACT ACTCGATAGA
ATGATTACAG ATATGGCTAA AGAAAACCCA GAGGTCGTAC ACCGCGCCTG GTGTGACGCA
GGGAGGATGC TCGCAGCATA TATAAAGGCG GTGTTTGGAG ACCTAGAGAA AGCAGTAGAG
CTGTCGCCAC ATTTAGCTAG AGTTGTGCCA GCCAGACGTT TTGAAATCAA GGCCAAAGGG
GGAGAGTTCT CCATGGATAC AGTAGGGGTT GGCTATAGTA TAGAAAGTGT ACAAGCCACC
GCCAGGGCAG TCCAGTGTCT ACTAGAGGAA CTCGGCTACG AGCTGAAAGA AGTTGTAACG
GCGCCAGGAA TCCTCCGCGT CAAAGCGCTG AAAAAGTAA
 
Protein sequence
MSMRKDRVNI AVAKEIAEEL AKVAEELGMT QYALANQILG VGLELLRQGY SLAQIKEITL 
FYKVMIELES VPVPGRLLDR MITDMAKENP EVVHRAWCDA GRMLAAYIKA VFGDLEKAVE
LSPHLARVVP ARRFEIKAKG GEFSMDTVGV GYSIESVQAT ARAVQCLLEE LGYELKEVVT
APGILRVKAL KK