| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1944 |
|---|
| Symbol | |
|---|
| ID | 4617836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | + |
|---|
| Start bp | 1759713 |
|---|
| End bp | 1760096 |
|---|
| Gene Length | 384 bp |
|---|
| Protein Length | 127 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639785035 |
|---|
| Product | paREP9 |
|---|
| Protein accession | YP_931434 |
|---|
| Protein GI | 119873427 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.899867 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.000000000000153546 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGGTTTTG TGGCTGGTGT GTATCTCTAC TTTGGCCGTG TGAAGATAGG CCCTCTCGTT
GGCTACTTGT GGCTTTTGGG CAGGCGGCTG TACCTCAAGC TGGGCTGGCG CCCTCGCGAC
ACTGTCTACC TCGGCTCTGT GGACGATCTT CTTGGCGTCG CCGTGAGGGT TAGGCGTCTC
GTCCCGAGGC CCCTCCCCGT TAGGCAACTC GTCGCTGCGC TGGTGGACGC CCTCAGGAAG
GCCTACTACG TGGCGAGCCG TTGCCGGGAC TCGCCGCGTT GGAAGATACG CGCCTGGGAG
GCGGCAATGG CCATAGAATA CGCCGCCACC GCCCTCGCCA TGTACTGGCC AAGCGCGGCT
AAGAAGATAC TAGACGACGG CTAG
|
|---|
| Protein sequence | MGFVAGVYLY FGRVKIGPLV GYLWLLGRRL YLKLGWRPRD TVYLGSVDDL LGVAVRVRRL
VPRPLPVRQL VAALVDALRK AYYVASRCRD SPRWKIRAWE AAMAIEYAAT ALAMYWPSAA
KKILDDG
|
|---|
| |