Gene Pisl_1924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1924 
Symbol 
ID4616343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1737300 
End bp1737992 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content63% 
IMG OID639785015 
Productmetallophosphoesterase 
Protein accessionYP_931414 
Protein GI119873407 
COG category[R] General function prediction only 
COG ID[COG1408] Predicted phosphohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.0467671 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGAGAC GCCAGCTGTT CACAGCCGCC GGCGCCCTAC TTCTGGCCGG CGGGCTCGCC 
GGTGGCTTCT ACACTGAGGT CACCACACTG GAGCTGGGCC TAGGGAGACG GGCGGCCTTC
CTCTCCGACC TCCACATCCA CACTCCGAGG AGACTTGAGC TCCCGCCCTA CGACATCCTG
TTGATAGGTG GAGACACCTA CGACGAACTC ACCGCCGATC TCGCGGCAGT GACGGAGACG
CTACGCCACC TGCCCAAGCC CAAAATCGCC GTGTTGGGAA ACCACGAGCA CTGGGCCTCC
CGCTGGATCC CCCTCCGCCG CGGCGTTGCG GCGCTAGAGG AGGCAGGAGT CTACGTCCTC
GCCGACGACT GGGTTCAGAT AGGGGGCCTC CGGATATATG GACTGGACTG GAGAGACGAC
CCCAGAGACT ACCCCCCGGT CAAGGACGCA GACGTTGTGC TGGTCCACTC GCCAGACGCC
TTCCATTTGG CTGTCGGTGG CCTCTATCTC GCGGGCCACA CCCACGGCGG CCACTTCTGC
TTGCCCGGCA ACGTCCCCTT GTACACCAAC AGTCGCTTTG GATACACCTG GGGTCTCTAC
AGGAGGGGCG AGGCACTCAT GTATGTCACG AGAGGCGCCG GGGAGATGAC GCCAAGGGTT
TTCTGCAGTA GAGAAATTGT CCTACTTACC TAA
 
Protein sequence
MRRRQLFTAA GALLLAGGLA GGFYTEVTTL ELGLGRRAAF LSDLHIHTPR RLELPPYDIL 
LIGGDTYDEL TADLAAVTET LRHLPKPKIA VLGNHEHWAS RWIPLRRGVA ALEEAGVYVL
ADDWVQIGGL RIYGLDWRDD PRDYPPVKDA DVVLVHSPDA FHLAVGGLYL AGHTHGGHFC
LPGNVPLYTN SRFGYTWGLY RRGEALMYVT RGAGEMTPRV FCSREIVLLT