Gene Pisl_1923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1923 
Symbol 
ID4616322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1736158 
End bp1737303 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content63% 
IMG OID639785014 
Productaminotransferase class-III 
Protein accessionYP_931413 
Protein GI119873406 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4992] Ornithine/acetylornithine aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.779903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.0552026 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTAGAA TCGCCAGATA CTACAGGGAG TACGGCCTGA GGATCGTCAA GGGGCTCCTC 
CAGTACGTCT GGGACGACGG GGGCAGGCGC TATCTAGACT GTAACACCAA CCACGGCGTT
GCCTTCCTAG GCCACGCCAA CCCCAAGATA GTGGAGGCCG TGAGGAGGCA GCTGGAGGAG
GTGTGGGCCG TGCCCCTCAA CTTCTCCACC CCCGCCAGGG AGCGGTTTAT AGAGGAGTTC
TCCAGACTCC TCCCCGCCAA ATTCGGCGTT GTGTTTCTAC AGAACACGGG AACAGAGGCC
GTGGAGACCG CCGTCAAAAT CGCCAAGAAG ATAACCAGGA GGCATACCAT CGTCGCCTTT
ACCAACAGCT TCCACGGGAG GACTATGGGC TCCCTCTCCA TAACCTGGAA CGAGAGGTAC
AGAAAGGCCT TCGAGCCCCT CTACCCCCAC GTGAGATTCG GCAAGTTCAA TGTCCCCACA
GAGGTGGACA AGCTGGTGCA GGAGGACACC TGCTGCGTGG TGGTGGAGCC GATACAGGGA
GAAGGCGGCG TCAACCCCGC CACCCCCGAA TTCCTAAAGG CCCTCAGAGA GGAGACCCAG
AGGAAGGGCG CCCTCTTCAT AATAGACGAG GTGCAGACGG GCTTCGGCAG AACAGGCGCC
GTCTGGGCCT TCCAGAAATA CGGCGTGGAG CCAGACATCT TCACGGCAGG AAAGGCTGTG
GCGGGAGGCC TACCCATCGG CCTGGCGGTG GCCCGGGAGG ACTTCGGCGA CGTGTTTGAG
CCCGGGGAGC ACGGATCTAC CTTCGCCGGA AACGCCGTGG TCATGGCGGC CGCCGCGGCC
GCCTCCCGTC TCCTCAGGGA GGAGGACGTC CCGGCCAAGG CCGAGAGGGC CGGCGCCGAG
TTGGCCAAGG CGCTGGGGGA GGTGGAGAGC AGACTCGCCG TTAGGGTGAA GGGGATGGGC
CTCATGCTAG GCCTAGAGCT GAGGGTCAAA GCCGACCAGT TCCTCCAGCC CCTCCTGGAG
CGGGGGGTCC TCGGGCTGAC CGCCGGCGTC AACACCCTGA GGTTCCTCCC GCCGTATATG
ATAACTAGGG AGGATATAGA GCTGGTACAC GCCGCGGTCT CCGAAGCCCT CAAGAGGGCC
CAGTGA
 
Protein sequence
MARIARYYRE YGLRIVKGLL QYVWDDGGRR YLDCNTNHGV AFLGHANPKI VEAVRRQLEE 
VWAVPLNFST PARERFIEEF SRLLPAKFGV VFLQNTGTEA VETAVKIAKK ITRRHTIVAF
TNSFHGRTMG SLSITWNERY RKAFEPLYPH VRFGKFNVPT EVDKLVQEDT CCVVVEPIQG
EGGVNPATPE FLKALREETQ RKGALFIIDE VQTGFGRTGA VWAFQKYGVE PDIFTAGKAV
AGGLPIGLAV AREDFGDVFE PGEHGSTFAG NAVVMAAAAA ASRLLREEDV PAKAERAGAE
LAKALGEVES RLAVRVKGMG LMLGLELRVK ADQFLQPLLE RGVLGLTAGV NTLRFLPPYM
ITREDIELVH AAVSEALKRA Q