Gene Pisl_1918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1918 
Symbol 
ID4617628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1733436 
End bp1734065 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content68% 
IMG OID639785009 
Productphosphoribosylanthranilate isomerase 
Protein accessionYP_931408 
Protein GI119873401 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0135] Phosphoribosylanthranilate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.745018 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.51908 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTAGTTA AGATCTGCGG CGTGGCAAGG CCAGAGGATG TGGCGCTTCT AGACGGCCTT 
GTGGACTACA TCGGCTTCAT AGTGGAGCCC TCCAGCCCCC GGTCGGTGGA GCCTAGGCGG
CTCGGGGAAC TGGTGCGGCT GGTTAGAGAG AGCAGGCCCG TGCTGGTGAC GGCTTCTCTC
CCGCCGGCCG AAGCCGTAGA TCTGGCGGCG TCGCTGGGGA TCCCGGTGGT CCAGCACCAC
GGGTCTCTGG GCGACGGCCA CTTCAGCTAC GCGGAGGAGA GGGGCGTGGC CCTCGCCCCG
GTGGCGGTGT ACAGACGGGG GGCCGATCTG AGAGCCGCCG TGTCACAGCT CCTCTCCAAG
CCCCACGAGT ACGTCCTAGT AGACGCAGAG AAGGGGAGCC GGGAGAGGTA CGAGGGCGGC
CTCAAGATCC CGCTCCAGGC GCTGGCCGAG GTGGCACACA TGGGGAAGGT GGCGCTCGCC
GGAGGCATCA CGCCGGAGAA CGCCCACCTC GTCGCGGCGC TGAGGCCCTA CATGGTGGAC
GTAGCAAGCG GCGTGGAGTC GTCGCCGGGG GTGAAGGACC CAGGAAAGGT CAAAGCCCTC
CTGAGGGCTC TCGGCCGCCT CTCCGGCTGA
 
Protein sequence
MLVKICGVAR PEDVALLDGL VDYIGFIVEP SSPRSVEPRR LGELVRLVRE SRPVLVTASL 
PPAEAVDLAA SLGIPVVQHH GSLGDGHFSY AEERGVALAP VAVYRRGADL RAAVSQLLSK
PHEYVLVDAE KGSRERYEGG LKIPLQALAE VAHMGKVALA GGITPENAHL VAALRPYMVD
VASGVESSPG VKDPGKVKAL LRALGRLSG