| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1916 |
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| Symbol | |
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| ID | 4617815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | - |
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| Start bp | 1731120 |
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| End bp | 1732382 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639785007 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_931406 |
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| Protein GI | 119873399 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
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| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.315987 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.860019 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTAGACC GCTGGTACAA CATCGCCGCT GATCTGCCCG GGGTCCTCGC TCCTCCTAAG
GACCCAGATG AGGGGGAGAG TAGAATCGCT CTTCTCACCA GGATCCTGCC CTCTGCGCTG
ATTGACCAGG AGTTCACCGC AGAGAGGTGG GTGCCCATAC CTGAGGAGGT GAGAGAGGTC
TATAGGCGGG TGGGGAGGCC TACCCCCCTT CTGAGGGCGG AGGGGTTTGA GCGGGCGCTT
GGGACTAAGG TGCACATATA CTACAAGTAC GAGGGGGTTC TGCCGGTGGG TAGCCACAAG
CTCAACACCG CGGTGGCTCA GGCCTACTAC GCAAAGGCGG ATGGGGCTGT GGAGGTGGCT
ACTGAGACGG GGGCGGGGCA GTGGGGGATG GCTGTGTCTC TCGCCGCGGC GCTCTTCGGC
CTCAAGGCGA CGGTCTTCAT GACCCGCTCC TCCTACAACA GCAAGAGGCA GAGACTGGTC
TTCATGAGGG CGTACGGCGC CACCGTCTAC CCAAGCCCCA GCGAGGTGAC CGAGACGGGC
AGGAGGCACT TCCGGCCCGA CCACCCGGGG TCCCTCGGCA TAGCCATATC TGAGGCCGTG
GAGTACGTCC TCTCGGGGGA GAGGAGAAAA TATCTGCCGG GTAGCGTTAT GGAGTTCGTC
CTCCTCCACC AGACAGTCAT AGGCCTTGAG GCCATGAGAC AGTTGCCCGA GGAGCCGGAC
TACGCGGTGG CTTGCGTCGG CGGGGGGTCT AACTTCGGCG GTTTCACATA CCCGATGCTT
GGGGCTAAGC TCAGGGGGGA GGGGTTTGGA AAAACCAAGT TTCTCGCCGT GGAGTCCGCC
GCCGCCCCTA AGCTGACGCG GGGGGAGTAT AGGTACGATT TCCCAGACGC CACGGGGATA
CTGCCGTTGA TTAAGATGTA CACCCTAGGC CACGACTACG TCCCCCCGCC TGTCCACGCG
GCGGGCCTGC GCTACCACGG CGCCGCTCCC AGCCTCTCTT TGCTTAAGCG GCTGGGCCAC
GTGGAGGCAG TGGCCTACGG CCAAGAGGAG GTTATGGAGG CGGCGTTGCT TTTTGCAAGA
TCAGAAGGCG TTTTGCCAGC TCCCGAATCG GCACATGCGG TAAGGGCTGT GATATATTTG
GCAAAAAAAC TCCCGCCAGG CTCTGTAGTT GTGTTTAACA TGTCTGGTCA TGGACTTCTT
GATGTTGACG CGTATGAAAA GGCTCTTGAG TGGGAGAAAA TATATAAACA CCCCGAAGAT
TAA
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| Protein sequence | MVDRWYNIAA DLPGVLAPPK DPDEGESRIA LLTRILPSAL IDQEFTAERW VPIPEEVREV
YRRVGRPTPL LRAEGFERAL GTKVHIYYKY EGVLPVGSHK LNTAVAQAYY AKADGAVEVA
TETGAGQWGM AVSLAAALFG LKATVFMTRS SYNSKRQRLV FMRAYGATVY PSPSEVTETG
RRHFRPDHPG SLGIAISEAV EYVLSGERRK YLPGSVMEFV LLHQTVIGLE AMRQLPEEPD
YAVACVGGGS NFGGFTYPML GAKLRGEGFG KTKFLAVESA AAPKLTRGEY RYDFPDATGI
LPLIKMYTLG HDYVPPPVHA AGLRYHGAAP SLSLLKRLGH VEAVAYGQEE VMEAALLFAR
SEGVLPAPES AHAVRAVIYL AKKLPPGSVV VFNMSGHGLL DVDAYEKALE WEKIYKHPED
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