Gene Pisl_1902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1902 
Symbol 
ID4616537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1718337 
End bp1719470 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content58% 
IMG OID639784993 
Producthypothetical protein 
Protein accessionYP_931392 
Protein GI119873385 
COG category[S] Function unknown 
COG ID[COG3372] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.486722 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCCCC TGGAGTACCT AAGAATTACG AAGAAGAGAG GCGAGGTAAA GCCGCTATAC 
CTTATCGACG AGTCTCCAGC CGCTGCGGTG CTTGAGGCTG TAAGAAAGTC GGCGACTATA
GGCGAGTTTA GGAAGAAAGT TGAGGCATTA GGTTGGGATA AGAGATTGAC AGGAGGCTTG
GCCCATCTTG TAGAACAGTT GGCCAAGGTG GAGGAGGTAG ACACCCGCTT AGTGGCCAAG
GTGAGGCTGG AGGTGTTCAA GGCCTCCGCC GCCGCGGGCT ACGCCCTAAC GCCCGAGGAC
CGGGAGAGGG TGTTCCAGGC GGCGGCCACC AAGCTGAGAA TGGACGTGGC CGAGGTGAAG
CGGCTCTTCT CCAAGGCCTA CGAGGAAAAC AGGGCCATCC TCCAGCCGCC CGACCTAACC
CCCGGGGACC TCCTCCGCCT CTACAATCTC TCCCTTATCC AGACCCTCCT CTTCAAATCG
CTATGGGTGA AGGCGAAGTT GCCCAATGAC CCCCCGCTTG TGAAAACCCT CGTGAGAGCT
GTAAAGGGTC TGAGACTGAT GTATACGGCG GAGGAAGCCG GAGACCAGCT GGCGTTTCAC
TTCGACGGGC CCGCCTCTGC ACTGAGGCAG ACAGAGCGCT ATGGCACGAG ACTCGCTAAG
CTCGTGCCCT ACATAGTGGC AGCGTCCAAC TGGAGTCTGG AGGCTGAGGT GAAGCTGGGC
GACCGTACCT ACCACTTCAG AGAGAGTTCG CAAACAGCGC CACCACTGGC TAGTAGACCG
CCGGCTGCCG ACGAGTTCGA CAGCTACGTG GAGCAGGAGT TCTACCGCCA AGTGTCCAGG
GTATGTCCAG TGGAGAGGGA GCCGGAGGTA CTGGTGGTGG AGGGCAGGGT CTACATACCG
GATTTTAAAA TCGGCGACTT ATATATAGAG GTTGTGGGGT TCTGGACGCC TGACTACCTG
AGGCGGAAGT ACGAAAAGGT TGTAAAAGTC GGCAAGCCCC TCCTGGTTCT GGTAGACGAG
GAGCTCGCCA TGTCCACCTG GAAGCAGCTC CTTCCCAACG TCGTGCTCTA CAAGGGGAGG
CCGCGGCTAG AAGACGTGTA CAAGTACATA AAGCCATACT GCAGGCGTCA GTAG
 
Protein sequence
MIPLEYLRIT KKRGEVKPLY LIDESPAAAV LEAVRKSATI GEFRKKVEAL GWDKRLTGGL 
AHLVEQLAKV EEVDTRLVAK VRLEVFKASA AAGYALTPED RERVFQAAAT KLRMDVAEVK
RLFSKAYEEN RAILQPPDLT PGDLLRLYNL SLIQTLLFKS LWVKAKLPND PPLVKTLVRA
VKGLRLMYTA EEAGDQLAFH FDGPASALRQ TERYGTRLAK LVPYIVAASN WSLEAEVKLG
DRTYHFRESS QTAPPLASRP PAADEFDSYV EQEFYRQVSR VCPVEREPEV LVVEGRVYIP
DFKIGDLYIE VVGFWTPDYL RRKYEKVVKV GKPLLVLVDE ELAMSTWKQL LPNVVLYKGR
PRLEDVYKYI KPYCRRQ