Gene Pisl_1901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1901 
Symbol 
ID4616561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1716985 
End bp1718340 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content57% 
IMG OID639784992 
Producttype III restriction enzyme, res subunit 
Protein accessionYP_931391 
Protein GI119873384 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1061] DNA or RNA helicases of superfamily II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGATTAA CGCTGGTTTG GGACAGGGGG ACAATACTTC TAGAGGGCGA CGTACCGAGG 
GAGCTCAAGA GCCTCCCCTT TATAAAATTC GACAGTAGAG TTAATAAATA TAGATCTCTC
GCCATATACT ACCCAAGGAT TCTGGCTGTT GCAAAGGCGG TGGGCATAGA GATTGAAGAC
AGAGTCTGGG CTCCACAGTG TAAAGAAGTT AGGCCTGCCA CAGAGGTCAA GCTGAGGAGT
TACCAGAGGG AGGCCCTTGA GGCTTGGATG AAGACCAAGC GTGGCGTCGT GGTCATGCCC
ACCGGCGCCG GCAAAACACA CGTGGCGATA GCCGCCATTG CTAAAATAGG CGAGCCAGCC
CTCGTGGTCG TTCCCACAGT GGAACTGGTG CAACAGTGGA GGACCCGCTT ATCCCACTAC
TTCCCGGGGA GGGTGGGGGT GTGGTACGGC GAAGAGAAGA GGGAGAGCTG CGTCACGGTG
ATCACTTACG ACTCAGCCTA CGCGGCGGTG GAGACCCTAG GCAACAAGTT TAGACTTCTC
GTATTTGACG AGGTGCACCA CCTCCCCTCC CAGTCCTACC GGCAGATAGC GGAGCTGAGC
CCAGCCCCAT ACCGCATGGG GCTGACGGCG ACGCCAGAGC GGTCAGACGG GCTACACGTA
GATTTGGACT GGCTAGTGGG CCCCGTGGTG TATAGGCTAT CCGCTGCCGA GGTGAGGGGC
TTGTGGACGG CGGACTACGA GGTAGAAGTT ATAAGAGTGC AGCTGAGGGA GGAGGAGAGA
GCGCTATACA AGGAGCTGGA GAGACAGTAC CTCGCCTACC TCAGGAAGAG GGGGTTGAGG
TTCAGATCGC CGTCGGACTT CCAAAAGCTC GTTGTTCTAG CCGGCCGCGA CCCCGAGGCG
AGGAAGGCCC TCGCCGCTTG GCATGGCATG AGACGGCTAA TCTTTGAGAC AGAGGCCAAG
GTAGACGCTG TGGGGGACAT ACTGGCGAGA CACAGAGACT CTAAGATAAT CATATTCACT
GAATACACCT CCCTGGCCAG GGCCGTGTCA GAGCGCTACC TCATACCTCT GGTGACGCAT
GACACCTCTC CCTACGAGAG GGAGCTGGTG ATGTCTGCCT TTAGGAGGGG GGAGTTCAAG
GCCATAGTCA CGGGGAAGGT GCTAGACGAG GGAGTTGACG TGCCCGACGT AGACGTGGTC
GTAATTCTGG GCGGAACCTC CAGTACAAGA CAATTCATAC AGAGGATGGG CCGCGCCCTT
AGGCTAAAGC CCCACAAGGC CAAGATATAC GAGGTGGTGA CCTCCAGCAC TAGGGAGGTC
GGGGCGGCGA GGAGAAGAAA GAAGGGCTTA ACGTGA
 
Protein sequence
MGLTLVWDRG TILLEGDVPR ELKSLPFIKF DSRVNKYRSL AIYYPRILAV AKAVGIEIED 
RVWAPQCKEV RPATEVKLRS YQREALEAWM KTKRGVVVMP TGAGKTHVAI AAIAKIGEPA
LVVVPTVELV QQWRTRLSHY FPGRVGVWYG EEKRESCVTV ITYDSAYAAV ETLGNKFRLL
VFDEVHHLPS QSYRQIAELS PAPYRMGLTA TPERSDGLHV DLDWLVGPVV YRLSAAEVRG
LWTADYEVEV IRVQLREEER ALYKELERQY LAYLRKRGLR FRSPSDFQKL VVLAGRDPEA
RKALAAWHGM RRLIFETEAK VDAVGDILAR HRDSKIIIFT EYTSLARAVS ERYLIPLVTH
DTSPYERELV MSAFRRGEFK AIVTGKVLDE GVDVPDVDVV VILGGTSSTR QFIQRMGRAL
RLKPHKAKIY EVVTSSTREV GAARRRKKGL T