Gene Pisl_1897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1897 
Symbol 
ID4617878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1713521 
End bp1714972 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content50% 
IMG OID639784988 
Productradical SAM domain-containing protein 
Protein accessionYP_931387 
Protein GI119873380 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.487619 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGACGCG TCGCGTATAG GAAAAACGCG GTCAAGGTCG CCCTCCTCTA CCCCTCCGCC 
TACGCGGTGG CCATGTCTTC CGTGGTTTTC CACATGCTTT ACTTCAAGCT CCAGGACGAG
GGGTTCTACG TCGAGCGGTT CACGGCGGAT CGGGGGCCCC ATGGGATTGA AGACGGCACA
CCTCTTGCCC ATTTCGACTA CATTGTGGCT GCAATACATT ACGAACTCGA CTATGTAAAT
CTGGTCAAGA TGCTTATAGA AGCAAAGATA CCTCCCAGGG CTAGAGAGAG GGAGAGGCCT
AAGTTGGTGA TCGGGGGGCC TCCCGTCACG GCGAATCCAG AGCCCCTCGC CGAGTTTGTA
GACGCTGTGG CTATAGGCGA GTTAGAGCCG TTGTGGAAAC CGCTTGTACA ATACTTGTCG
ACTGGAGAAG AGACGGAGGA GCTGTACTAC CCTGCATACG GCCCGCGGCC TATTAAAATT
GCATACGCGA CTGACGCCGT CTCTGACTAT AGACGTATAC CCGAGCCAGA GGCGGCCTTT
AGTCTCTCTG TAGAGTTGGC AAGAGGCTGT CCCTACGCTT GCCTCTTCTG TATGGAGAGC
TATATCTCAA AGCCCTACCG GCCTAGAGAT TGGCGTGTTG TTTTGCAAGA GACTGAAGAG
CTGTATAAAA AATATGGAAT TAGGCCTTCT ATTGTTGCTC TAACAGCAAA CGCACACCCA
CACTTTAAAA CTATGCTTAG AGAGGCCGTT AACAAGGGCG TGCCTATTTC TCTCCCATCG
CTAAGAGCCG AGTTGCTTGA TGATGAAATG TTGGAGCTTA TAGCGGCAGG GGGGCAAAAG
ACTTTAACTA TCGCCCCCGA GTCTAGCGAG AGACTGAGAA AAGCCTTGGG GAAAGACATC
TCAAATAAAG ACATCTTGAG AGTAGTTGAT AAAGCGGCTG AACTAGGCCT GAAGATAAAG
ATGTACCTAA TGGCCGGCCT CCCCTGTGAA GAGGAGGGGG ATATAGAAGA GCTTATAAAT
TTAATTAAGG AAGTAGGCAG GATGGGAGTT CGTCTATCTC TTAGCGTAAA CCCCTTTATC
CCTAAGCCTC AGACGCCGTT TCAATACAGC GCTATGGAAA ATATTAAACG TCTAAGAGAC
AAGATTAAAC GTCTACAGAG GGCCTCCCGT GGCGAATTTA CATATTATGA GCCTACGCTC
GGCGCTATAC AAGCAGGTAT AGCGCTAGGC GGCAGAGAAA TTGCAAAATA TATAGAAGAG
GCCGCCATGG CGGCGTCGCC ACAAGGCTAC CTAAGGCGGC TGTTAAAAAG AGGCGTGTTT
AACTACGTCT TTAGCCCAAG AGACGACCCC CTCCCTTGGG GTCACATAGA GGGCTTCTAC
TCTCACAGTG AGTTAAAGAG ACGTTATCTA GAGTACTTAG AGACGGCTTG CGGCAAGAGT
CAGCCAGATT AA
 
Protein sequence
MRRVAYRKNA VKVALLYPSA YAVAMSSVVF HMLYFKLQDE GFYVERFTAD RGPHGIEDGT 
PLAHFDYIVA AIHYELDYVN LVKMLIEAKI PPRARERERP KLVIGGPPVT ANPEPLAEFV
DAVAIGELEP LWKPLVQYLS TGEETEELYY PAYGPRPIKI AYATDAVSDY RRIPEPEAAF
SLSVELARGC PYACLFCMES YISKPYRPRD WRVVLQETEE LYKKYGIRPS IVALTANAHP
HFKTMLREAV NKGVPISLPS LRAELLDDEM LELIAAGGQK TLTIAPESSE RLRKALGKDI
SNKDILRVVD KAAELGLKIK MYLMAGLPCE EEGDIEELIN LIKEVGRMGV RLSLSVNPFI
PKPQTPFQYS AMENIKRLRD KIKRLQRASR GEFTYYEPTL GAIQAGIALG GREIAKYIEE
AAMAASPQGY LRRLLKRGVF NYVFSPRDDP LPWGHIEGFY SHSELKRRYL EYLETACGKS
QPD