Gene Pisl_1890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1890 
Symbol 
ID4617571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1708598 
End bp1709794 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content52% 
IMG OID639784981 
Productradical SAM domain-containing protein 
Protein accessionYP_931380 
Protein GI119873373 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATATG CCGTAGCCCC TGTGGAGGAT AAATATCGGA TAGTGCCAAC GCGAAACCCG 
CTGGCAGACG CGGCGGCGTT GGCAGAAAAG GGCAAACAGT TTTTAGTACT CTACAGCCTC
TCGACACCTA CCTTTGTAGA ACATTGGCGC GAAATTTTAG AGGTAGCCTC TAGGTATCCA
GTAGTAGTCG GTGGCCCACA TGCGGTAGGT GACCCGCTTA CGTTATTAAA ACTCGGCGTT
AAATATGTGG TAGTTGGCGA TGGAGAAGTT GCCCTCCCGG CTATTATAGA GAGAGAGGTT
AACGCTGGGA GGGATATACC GCCGAATACA GTAATGTTTA TAGACGGGAG GCCTAGAGCG
GGTCGCCGCC TCTATGCGGA ACTCATCTAT AAGACATATA GCAAATCGTT GGGGATATAC
CCGCCGATTG AAATAATGAG GTCTTGCGCA TATAGATGCG CCTTTTGCCA AACCTGGGCG
CAAGGCCCCC TCCGCTTCAG GCCACTGGAA AATGTCGTAG AGCTAGCTAA GGCTTATGTA
TCTACCGGCC ATAGAGAGAT CAGGTTTATA GCACCGGTGG GCTTTCTCTA CGGGTCGTCG
GACGGCAGAA CTCCTAACCC AGACGCGTTA GCGAGCTTGC TCAAGTCGAT TAGAGAGACT
GGCGGAGTAC CATATCTCGG AACCTTTCCC TCGGAGACTA GGCCAGAGAC TGTGACACGA
GACATTCTCA AGGCGATTAA GCCATATGTT GCAAACCGCC GTATTTCTTT CGGCCTACAG
ACCGCTTCTG AGAAACTGTT AAAGTTAACA AAAAGGGGTC ACGACATCGC CACAGTTGAG
GAGGCGGTTA AAACTGCGGT TTCAATGGGC TTTAAGCCAG TGGTAGATGT AATAGGGGGG
CTGCCAGGCG AGGATGAAGA TGATGTCGTA GAGACAGTGA GAGAGATGGA GAAGCTGATC
GCCATGGGGG CAAACATCCG CATGCATTAT TACATACCCC TTCCTGGCAC ACCGCTGTGG
GGCCGCCGCC CCGCACCGCC ACACCCACTT TATGAACAAT TCATAAAGAG ACATAGGAGG
AAGGTGGAGG GCTACTGGAG GGAGCAGATA GAGCTCAGCA AGAGGATAGT GGAGACGTAT
AGAGAGCTCG ACGCTTACCT ACGCGTGCGC ACGACGCCGA GCTCCACGGC CAGCTGA
 
Protein sequence
MAYAVAPVED KYRIVPTRNP LADAAALAEK GKQFLVLYSL STPTFVEHWR EILEVASRYP 
VVVGGPHAVG DPLTLLKLGV KYVVVGDGEV ALPAIIEREV NAGRDIPPNT VMFIDGRPRA
GRRLYAELIY KTYSKSLGIY PPIEIMRSCA YRCAFCQTWA QGPLRFRPLE NVVELAKAYV
STGHREIRFI APVGFLYGSS DGRTPNPDAL ASLLKSIRET GGVPYLGTFP SETRPETVTR
DILKAIKPYV ANRRISFGLQ TASEKLLKLT KRGHDIATVE EAVKTAVSMG FKPVVDVIGG
LPGEDEDDVV ETVREMEKLI AMGANIRMHY YIPLPGTPLW GRRPAPPHPL YEQFIKRHRR
KVEGYWREQI ELSKRIVETY RELDAYLRVR TTPSSTAS