Gene Pisl_1884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1884 
Symbol 
ID4617216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1703084 
End bp1703497 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content43% 
IMG OID639784973 
ProductUspA domain-containing protein 
Protein accessionYP_931374 
Protein GI119873367 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAA TCGTGGTAGG ATATGACGGC TCTCCTCAAG CCAAAAAGGC CCTTCAAAAG 
GCGAAAGTCC TCGCAGAGAA ATTTGGATCT AAGATCTATG TTGTACATGT AATAGACACG
GCGATATTAT CTCTCTCCGA CATGTTTTCC TCGCCTACAG TATTAACAAG TTTGAGAGAG
AAAGCCGAAC AATTAATAAA AGAGGCCTTA GAGGCCTTAG GTGGTAATGC GGAGGGCAAA
ATACTTGAAG GCGATCCAGC TCACGAAATT GTGAAACTCG CAAGAGAGAT AAACGCGTCT
CTTATAATAC TGGGGGCTAG AGGGCTTTCA ACAATTAGGC GTATTTTAAT GGGTAGCGTA
TCTTCAAGAG TTGTACAAGA GTCGCCGATA GACGTCTTAA TAGTCAAAGG CTAG
 
Protein sequence
MEKIVVGYDG SPQAKKALQK AKVLAEKFGS KIYVVHVIDT AILSLSDMFS SPTVLTSLRE 
KAEQLIKEAL EALGGNAEGK ILEGDPAHEI VKLAREINAS LIILGARGLS TIRRILMGSV
SSRVVQESPI DVLIVKG