Gene Pisl_1883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1883 
Symbol 
ID4617806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1701781 
End bp1702977 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content47% 
IMG OID639784972 
Productmajor facilitator transporter 
Protein accessionYP_931373 
Protein GI119873366 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.71782 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGCTCT CATTTTGGCT TAGGGGGAAC GTGGGCGCTA TGATAATCTC GTGGTTTCTA 
TTCGCGATAT CAGGTTCGTT AACTCAGCCC TATATGTCTA AATACCTACA TATGTTGGGG
GCGTCAGACA TCGAGATAGG CCTTGTGAGA TCTCTTGGCT CTCTTGCCGT ATTGCTTACT
ATCCTCCCGG GGGGAGTTTT AACAGATGTA GTCGGGAGGA AGAGGTCTAT TGTGGTGGGT
ACGTGGGGGA TAGCGATAGT CCAGTTTTTC TACGCCGCGG TTCAAGACTG GAGACAATTT
GCCGTTGTAT ATGTGATAGA TTGGGCACTC CATTTTTATC AACCAGCTCT AACAGCAATA
TTACTTGACT CTCTCCCACC TGATAAAAGG GGCGGGGGCA TGATGCTGAC TGCAGTCCTC
CCACAAGTGC CCTGGCTTTT TCTACCGCCA GTAGGCGGAT ACCTCTTAGA CCACATGGGA
CTTTTCGGTA TGCGTCTATC ATTCATAATC TCTGGTCTGA TTTCAGTTAC AGTAGCTGTA
TTGCGTATGA GAGCCCTCCA AGAGACTATA GAAATTAAGC CGATAGACGG CAGGAAATTA
ATCTCAGAAA TTCTACAATC TTACCACTTC TGGAGAGGGA TGTCTACAAT GCCCTCTTTT
ATCATATATA TCACACTTCT AGGGTTTTTA GTCTCGTTTG CCGGAATCTC TCTACAGACT
TTTGGCGTGT TATATGCGAC AAACGTGATC GGCATAGATA ATACGTCTTG GGGAGTTATA
CAGAGCGCCA CAACTGCCGT TGGAATCTTC TTCGGCCTTA TCTTAATGCC AGTTATAGAC
AAGGCGCCTC GTGTAACAGC TCTCTTCTCC GGGCTACTTC TAATGGCTGT GGGCTACTTT
ATGATTGGAG TTTGGAAAAA CGTAGTTTCG TTAGTCACAG CAACTATAAT TATAGGGATT
GGCGGCGAGA TCGCCATGTC TATAAGAAGG GCTTTAGTCG GCGATTATAT AACGCCGGAG
AATAGGGGGA GGGTTATGGG CGCGACGCTG GCGTTAGAAT ATTCTGGAGC CATCGCCGGA
GGCGTGACTG TGGCTTATAT ATATTCTATA TCTCCTCATC TGGCGTTTAT ACTCTCAGGC
GCGATTTTAT CTATTTCTGC ACTGCCGTTG ATACGTGGAG TTCTACAAGC TCGTTAG
 
Protein sequence
MGLSFWLRGN VGAMIISWFL FAISGSLTQP YMSKYLHMLG ASDIEIGLVR SLGSLAVLLT 
ILPGGVLTDV VGRKRSIVVG TWGIAIVQFF YAAVQDWRQF AVVYVIDWAL HFYQPALTAI
LLDSLPPDKR GGGMMLTAVL PQVPWLFLPP VGGYLLDHMG LFGMRLSFII SGLISVTVAV
LRMRALQETI EIKPIDGRKL ISEILQSYHF WRGMSTMPSF IIYITLLGFL VSFAGISLQT
FGVLYATNVI GIDNTSWGVI QSATTAVGIF FGLILMPVID KAPRVTALFS GLLLMAVGYF
MIGVWKNVVS LVTATIIIGI GGEIAMSIRR ALVGDYITPE NRGRVMGATL ALEYSGAIAG
GVTVAYIYSI SPHLAFILSG AILSISALPL IRGVLQAR