| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_1878 |
|---|
| Symbol | |
|---|
| ID | 4617106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | - |
|---|
| Start bp | 1697492 |
|---|
| End bp | 1698187 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 639784966 |
|---|
| Product | sugar fermentation stimulation protein |
|---|
| Protein accession | YP_931368 |
|---|
| Protein GI | 119873361 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
|---|
| TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACTTCC CTATTGAGAA ACCTGACGTC TGGGGGATTT TTAAAAAGAG ACTTAATAGA
TTTGTTGGAT TGGCTGAAAT AGATGGAGTT GAAACTCTTG TACATATCCA TGACCCAGGT
AGGCTTCAAG AGTTGTTATT TCCCGGCGCA ATGATATGGG CTAGGCGTAA ACAGAGGGGC
AAGACACAAT ATTATCTAAC TGCCGTAGAA CTAGACGACG AACTTGTACT TATAGATCCG
GCAGCACATA ACAAAGTAAC GTCTTGGCTA ATAGAGGCCG GATTCTTACT ACGCGGATAT
GCAATTGAGA GATATGAGCC AGCCTTTGGA AAGGGGCGGT TTGATCTCTT ACTCAGAGGG
CCCAATGGCC AGAGGGCTCT TGTAGAAGTC AAGGGCGTCA CGCTTGAAGC TGGCGGTAGA
GCGCTTTTTC CAGACGCCCC AACTTCAAGA GGTGCGCGGC ATATGGAAGA GCTTGCAAAA
GCAGTGACGG AGGGCTTTGA GGCCCATGTT ATATTTCTAG TGTTTAGGAA GAGGGCTAAG
GTATTTTCGC CGAACTGGGA GATGGACAGA AAGTTTGCAG AAGCTCTGGT CAGGGCTTAC
AGAAGCGGCG TCTATATACA CGCGGTAAAA TTAGAGATGT TTAAATGGGG TCTGAGATAT
ATAGAGGAGT TGCCTATCGA TTTGCTAGCT CTTTGA
|
|---|
| Protein sequence | MYFPIEKPDV WGIFKKRLNR FVGLAEIDGV ETLVHIHDPG RLQELLFPGA MIWARRKQRG
KTQYYLTAVE LDDELVLIDP AAHNKVTSWL IEAGFLLRGY AIERYEPAFG KGRFDLLLRG
PNGQRALVEV KGVTLEAGGR ALFPDAPTSR GARHMEELAK AVTEGFEAHV IFLVFRKRAK
VFSPNWEMDR KFAEALVRAY RSGVYIHAVK LEMFKWGLRY IEELPIDLLA L
|
|---|
| |