Gene Pisl_1859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1859 
Symbol 
ID4618179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1684255 
End bp1684950 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content48% 
IMG OID639784945 
Producthypothetical protein 
Protein accessionYP_931350 
Protein GI119873343 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.868685 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGTGT TTGTTGGGAC GTCTGGGTGG CTCTATTCTT GGAATTTAGG CAAGTCGCTT 
GAATGGTATG TGGAACAGAG CGGGCTTAAC GCCGTTGAGC TCAACGCCAG TTTCTACAGA
TTTCCCACTA AGAGACAAAC GGCGAAGTGG GCAAAAGTCG GCGGTGGGCT TAGGTGGGCT
GTGAAGGTGT ATAGAGGGGT TACCCACTTC GGCAGACTTT CTGATAGAGC ACTAGAGCTG
TTGAAAAGGT TTTTCGAAGT GTTCAAGCCG CTTGACCCAT ATGTAGATTT CTATCTTTTC
CAAATGCCGC CTATCTTTGT CAAATCTAGC GTCAATATGT CACGAGTGGA GAAAATTGCC
GGCTTGCTCG GGAGGAGGGC GGCGTTTGAA TTTAGACACC CCAGCTGGTT TAGTAAAGAC
ATTGTGGAAT GGGCTGAGGA TGTGGGCTTT ACCCCCGTTT CTATAGATTC GCCAGATTGG
GTTTGGATCG TAGAAGCTGG GGGAACCGTG TATCTACGGA TGCACGGACG AACGCTTTGG
TATTCACATT ACTATGACGA AGAGGAGCTT AGAGAGGTTG CACAGAAAAT TATAGAACTT
AAGCCGGAGA GGGCCTATGT CTTTTTCAAC AACAACCACG CCATGTTAGA AAACGCCAGG
GCTATGTTTA CAATTTTAAA AGAGCTTACG CAGTAG
 
Protein sequence
MEVFVGTSGW LYSWNLGKSL EWYVEQSGLN AVELNASFYR FPTKRQTAKW AKVGGGLRWA 
VKVYRGVTHF GRLSDRALEL LKRFFEVFKP LDPYVDFYLF QMPPIFVKSS VNMSRVEKIA
GLLGRRAAFE FRHPSWFSKD IVEWAEDVGF TPVSIDSPDW VWIVEAGGTV YLRMHGRTLW
YSHYYDEEEL REVAQKIIEL KPERAYVFFN NNHAMLENAR AMFTILKELT Q